Difference between revisions of "Tiso gene 17272"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7490 PWY-7490] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Gene == Gene Tiso_gene_17272 == * right end position: ** 2201 * transcription direction: ** POSITIVE * left end position: ** 2045 * centisome position: ** 53.6604...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7490 PWY-7490] ==
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== Gene Tiso_gene_17272 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** 2201
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* common name:
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* transcription direction:
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** patulin biosynthesis
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** POSITIVE
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* left end position:
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** 2045
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* centisome position:
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** 53.660458   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''1''' reactions found over '''15''' reactions in the full pathway
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* Reaction: [[CDPKIN-RXN]]
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* [[2.3.1.165-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 5 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_500]]
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* Reaction: [[DADPKIN-RXN]]
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*** [[Tiso_gene_136]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_13394]]
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*** Assignment: ec-number
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*** [[Tiso_gene_135]]
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* Reaction: [[DCDPKIN-RXN]]
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*** [[Tiso_gene_10876]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 reconstruction source(s) associated:
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*** Assignment: ec-number
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*** [[annotation-in-silico_annotation]]
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* Reaction: [[DGDPKIN-RXN]]
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== Reaction(s) not found ==
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.97-RXN 1.1.1.97-RXN]
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*** Assignment: ec-number
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* [http://metacyc.org/META/NEW-IMAGE?object=3-OH-BENZALDEHYDE-DEHYDROG-NADP+-RXN 3-OH-BENZALDEHYDE-DEHYDROG-NADP+-RXN]
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* Reaction: [[DTDPKIN-RXN]]
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* [http://metacyc.org/META/NEW-IMAGE?object=6-METHYLSALICYLATE-DECARBOXYLASE-RXN 6-METHYLSALICYLATE-DECARBOXYLASE-RXN]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15470 RXN-15470]
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*** Assignment: ec-number
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15472 RXN-15472]
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* Reaction: [[DUDPKIN-RXN]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15473 RXN-15473]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15475 RXN-15475]
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*** Assignment: ec-number
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15478 RXN-15478]
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* Reaction: [[GDPKIN-RXN]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15480 RXN-15480]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15481 RXN-15481]
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*** Assignment: ec-number
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15482 RXN-15482]
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* Reaction: [[NUCLEOSIDE-DIP-KIN-RXN]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15483 RXN-15483]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15484 RXN-15484]
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*** Assignment: ec-number
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15485 RXN-15485]
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* Reaction: [[RXN-14120]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14228]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[UDPKIN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7210]]
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* [[PWY-7198]]
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* [[PWY-7176]]
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* [[PWY-7220]]
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* [[PWY-7184]]
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* [[PWY-7222]]
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* [[PWY-7205]]
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* [[PWY-7224]]
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* [[PWY-7197]]
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* [[PWY0-166]]
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* [[PWY-7227]]
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* [[PPGPPMET-PWY]]
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* [[PWY-7226]]
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* [[PWY-7221]]
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* [[PWY-6545]]
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* [[PWY-7187]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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{{#set: right end position=2201}}
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{{#set: common name=patulin biosynthesis}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: reaction found=1}}
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{{#set: left end position=2045}}
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{{#set: total reaction=15}}
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{{#set: centisome position=53.660458    }}
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{{#set: completion rate=7.0}}
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{{#set: reaction associated=CDPKIN-RXN|DADPKIN-RXN|DCDPKIN-RXN|DGDPKIN-RXN|DTDPKIN-RXN|DUDPKIN-RXN|GDPKIN-RXN|NUCLEOSIDE-DIP-KIN-RXN|RXN-14120|RXN-14228|UDPKIN-RXN}}
 +
{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7176|PWY-7220|PWY-7184|PWY-7222|PWY-7205|PWY-7224|PWY-7197|PWY0-166|PWY-7227|PPGPPMET-PWY|PWY-7226|PWY-7221|PWY-6545|PWY-7187}}

Latest revision as of 19:28, 21 March 2018

Gene Tiso_gene_17272

  • right end position:
    • 2201
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2045
  • centisome position:
    • 53.660458
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17272&oldid=41832"