Difference between revisions of "RXN-10711"

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(Created page with "Category:Gene == Gene Tiso_gene_9290 == * left end position: ** 2856 * transcription direction: ** NEGATIVE * right end position: ** 6446 * centisome position: ** 30.18389...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10711 RXN-10711] == * direction: ** LEFT-TO-RIGHT * common name: ** sialate_o-acetylesterase-li...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_9290 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10711 RXN-10711] ==
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* left end position:
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* direction:
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** 2856
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** sialate_o-acetylesterase-like_protein
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* right end position:
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** protein_chloroplastic
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** 6446
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** alpha_beta_hydrolase_fold_protein
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* centisome position:
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** serine_esterase
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** 30.183893   
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** ORF
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** lysophospholipase
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** alpha_beta_hydrolase
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** para-nitrobenzyl_esterase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[CDPKIN-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CPD-10546]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INDOLE_ACETATE_AUXIN]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[METOH]][c]
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***ec-number
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* With common name(s):
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* [[DADPKIN-RXN]]
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** 1 methyl (indol-3-yl)acetate[c] '''+''' 1 H2O[c] '''=>''' 1 indole-3-acetate[c] '''+''' 1 H+[c] '''+''' 1 methanol[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[DCDPKIN-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* Gene: [[Tiso_gene_2556]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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* [[DGDPKIN-RXN]]
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*** Assignment: EC-NUMBER
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** in-silico_annotation
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* Gene: [[Tiso_gene_4650]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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* [[DTDPKIN-RXN]]
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*** Assignment: EC-NUMBER
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** in-silico_annotation
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** Source: [[orthology-esiliculosus]]
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***ec-number
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* Gene: [[Tiso_gene_17029]]
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* [[DUDPKIN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** in-silico_annotation
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*** Assignment: EC-NUMBER
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***ec-number
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* Gene: [[Tiso_gene_10066]]
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* [[GDPKIN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** in-silico_annotation
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*** Assignment: EC-NUMBER
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***ec-number
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* Gene: [[Tiso_gene_4606]]
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* [[NUCLEOSIDE-DIP-KIN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** in-silico_annotation
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*** Assignment: EC-NUMBER
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***ec-number
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* Gene: [[Tiso_gene_19778]]
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* [[RXN-14120]]
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** Source: [[annotation-in-silico_annotation]]
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** in-silico_annotation
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*** Assignment: EC-NUMBER
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***ec-number
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* Gene: [[Tiso_gene_11351]]
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* [[RXN-14228]]
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** Source: [[annotation-experimental_annotation]]
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** in-silico_annotation
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*** Assignment: AUTOMATED-NAME-MATCH
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***ec-number
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* Gene: [[Tiso_gene_9429]]
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* [[UDPKIN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** in-silico_annotation
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*** Assignment: EC-NUMBER
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***ec-number
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* Gene: [[Tiso_gene_1922]]
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== Pathways associated ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-7210]]
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*** Assignment: EC-NUMBER
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* [[PWY-7198]]
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* Gene: [[Tiso_gene_12686]]
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* [[PWY-7176]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-7220]]
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*** Assignment: EC-NUMBER
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* [[PWY-7184]]
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* Gene: [[Tiso_gene_1538]]
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* [[PWY-7222]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-7205]]
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* Gene: [[Tiso_gene_16518]]
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* [[PWY-7224]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-7197]]
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* Gene: [[Tiso_gene_1537]]
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* [[PWY0-166]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-7227]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PPGPPMET-PWY]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-7226]]
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== Pathways  ==
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* [[PWY-7221]]
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* [[PWY-6303]], methyl indole-3-acetate interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6303 PWY-6303]
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* [[PWY-6545]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7187]]
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=2856}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=sialate_o-acetylesterase-like_protein}}
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{{#set: right end position=6446}}
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{{#set: common name=protein_chloroplastic}}
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{{#set: centisome position=30.183893    }}
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{{#set: common name=alpha_beta_hydrolase_fold_protein}}
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{{#set: reaction associated=CDPKIN-RXN|DADPKIN-RXN|DCDPKIN-RXN|DGDPKIN-RXN|DTDPKIN-RXN|DUDPKIN-RXN|GDPKIN-RXN|NUCLEOSIDE-DIP-KIN-RXN|RXN-14120|RXN-14228|UDPKIN-RXN}}
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{{#set: common name=serine_esterase}}
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7176|PWY-7220|PWY-7184|PWY-7222|PWY-7205|PWY-7224|PWY-7197|PWY0-166|PWY-7227|PPGPPMET-PWY|PWY-7226|PWY-7221|PWY-6545|PWY-7187}}
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{{#set: common name=ORF}}
 +
{{#set: common name=lysophospholipase}}
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{{#set: common name=alpha_beta_hydrolase}}
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{{#set: common name=para-nitrobenzyl_esterase}}
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{{#set: ec number=EC-3.1.1.1}}
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{{#set: gene associated=Tiso_gene_2556|Tiso_gene_4650|Tiso_gene_17029|Tiso_gene_10066|Tiso_gene_4606|Tiso_gene_19778|Tiso_gene_11351|Tiso_gene_9429|Tiso_gene_1922|Tiso_gene_12686|Tiso_gene_1538|Tiso_gene_16518|Tiso_gene_1537}}
 +
{{#set: in pathway=PWY-6303}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:28, 21 March 2018

Reaction RXN-10711

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • sialate_o-acetylesterase-like_protein
    • protein_chloroplastic
    • alpha_beta_hydrolase_fold_protein
    • serine_esterase
    • ORF
    • lysophospholipase
    • alpha_beta_hydrolase
    • para-nitrobenzyl_esterase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6303, methyl indole-3-acetate interconversion: PWY-6303
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10711&oldid=41842"