Difference between revisions of "RXN-12459"

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(Created page with "Category:Gene == Gene Tiso_gene_17272 == * left end position: ** 2045 * transcription direction: ** POSITIVE * right end position: ** 2201 * centisome position: ** 53.6604...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12459 RXN-12459] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_(guanine-n1)-methyltra...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_17272 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12459 RXN-12459] ==
* left end position:
+
* direction:
** 2045
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
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** trna_(guanine-n1)-methyltransferase_family_protein
* right end position:
+
** trna_(guanine-n1-)-methyltransferase_domain_containing_protein
** 2201
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** mitochondrial_ribonuclease_p_protein_1_homolog
* centisome position:
+
* ec number:
** 53.660458   
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** [http://enzyme.expasy.org/EC/2.1.1.221 EC-2.1.1.221]
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[CDPKIN-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[Guanine9-in-tRNA]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[tRNA-Containing-N1-Methylguanine-9]][c]
***ec-number
+
* With common name(s):
* [[DADPKIN-RXN]]
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** 1 a guanine9 in tRNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 an N1-methylguanine9 in tRNA[c]
** in-silico_annotation
+
 
***ec-number
+
== Genes associated with this reaction  ==
* [[DCDPKIN-RXN]]
+
Genes have been associated with this reaction based on different elements listed below.
** in-silico_annotation
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* Gene: [[Tiso_gene_5025]]
***ec-number
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** Source: [[annotation-in-silico_annotation]]
* [[DGDPKIN-RXN]]
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*** Assignment: EC-NUMBER
** in-silico_annotation
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* Gene: [[Tiso_gene_910]]
***ec-number
+
** Source: [[annotation-in-silico_annotation]]
* [[DTDPKIN-RXN]]
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*** Assignment: EC-NUMBER
** in-silico_annotation
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* Gene: [[Tiso_gene_909]]
***ec-number
+
** Source: [[annotation-in-silico_annotation]]
* [[DUDPKIN-RXN]]
+
*** Assignment: EC-NUMBER
** in-silico_annotation
+
* Gene: [[Tiso_gene_299]]
***ec-number
+
** Source: [[annotation-in-silico_annotation]]
* [[GDPKIN-RXN]]
+
*** Assignment: EC-NUMBER
** in-silico_annotation
+
== Pathways  ==
***ec-number
+
== Reconstruction information  ==
* [[NUCLEOSIDE-DIP-KIN-RXN]]
+
* Category: [[annotation]]
** in-silico_annotation
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** Source: [[annotation-in-silico_annotation]]
***ec-number
+
*** Tool: [[pathwaytools]]
* [[RXN-14120]]
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** in-silico_annotation
+
***ec-number
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* [[RXN-14228]]
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** in-silico_annotation
+
***ec-number
+
* [[UDPKIN-RXN]]
+
** in-silico_annotation
+
***ec-number
+
== Pathways associated ==
+
* [[PWY-7210]]
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* [[PWY-7198]]
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* [[PWY-7176]]
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* [[PWY-7220]]
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* [[PWY-7184]]
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* [[PWY-7222]]
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* [[PWY-7205]]
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* [[PWY-7224]]
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* [[PWY-7197]]
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* [[PWY0-166]]
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* [[PWY-7227]]
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* [[PPGPPMET-PWY]]
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* [[PWY-7226]]
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* [[PWY-7221]]
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* [[PWY-6545]]
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* [[PWY-7187]]
+
 
== External links  ==
 
== External links  ==
{{#set: left end position=2045}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=trna_(guanine-n1)-methyltransferase_family_protein}}
{{#set: right end position=2201}}
+
{{#set: common name=trna_(guanine-n1-)-methyltransferase_domain_containing_protein}}
{{#set: centisome position=53.660458    }}
+
{{#set: common name=mitochondrial_ribonuclease_p_protein_1_homolog}}
{{#set: reaction associated=CDPKIN-RXN|DADPKIN-RXN|DCDPKIN-RXN|DGDPKIN-RXN|DTDPKIN-RXN|DUDPKIN-RXN|GDPKIN-RXN|NUCLEOSIDE-DIP-KIN-RXN|RXN-14120|RXN-14228|UDPKIN-RXN}}
+
{{#set: ec number=EC-2.1.1.221}}
{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7176|PWY-7220|PWY-7184|PWY-7222|PWY-7205|PWY-7224|PWY-7197|PWY0-166|PWY-7227|PPGPPMET-PWY|PWY-7226|PWY-7221|PWY-6545|PWY-7187}}
+
{{#set: gene associated=Tiso_gene_5025|Tiso_gene_910|Tiso_gene_909|Tiso_gene_299}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:28, 21 March 2018

Reaction RXN-12459

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • trna_(guanine-n1)-methyltransferase_family_protein
    • trna_(guanine-n1-)-methyltransferase_domain_containing_protein
    • mitochondrial_ribonuclease_p_protein_1_homolog
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links