Difference between revisions of "RXN-8022"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8037 RXN-8037] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8022 RXN-8022] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** Crtlb ** phytoene desaturase (...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8037 RXN-8037] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8022 RXN-8022] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* Synonym(s):
 
* Synonym(s):
 +
** Crtlb
 +
** phytoene desaturase (ambiguous)
 +
** 2-step phytoene desaturase (ambiguous)
 +
** two-step phytoene desaturase (ambiguous)
 +
** CrtI (ambiguous)
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[CPD-7418]][c] '''=>''' 1 [[COUMARIN]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[CPD1F-98]][c] '''+''' 1 [[Acceptor]][c] '''=>''' 1 [[Donor-H2]][c] '''+''' 1 [[NEUROSPORENE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 coumarinate[c] '''=>''' 1 coumarin[c] '''+''' 1 H2O[c]
+
** 1 all-trans-ζ-carotene[c] '''+''' 1 an oxidized electron acceptor[c] '''=>''' 1 a reduced electron acceptor[c] '''+''' 1 all-trans neurosporene[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_7142]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5176]], coumarin biosynthesis (via 2-coumarate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5176 PWY-5176]
+
* [[PWY-6287]], neurosporene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6287 PWY-6287]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30614 30614]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04999 R04999]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04798 R04798]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: in pathway=PWY-5176}}
+
{{#set: common name=Crtlb|phytoene desaturase (ambiguous)|2-step phytoene desaturase (ambiguous)|two-step phytoene desaturase (ambiguous)|CrtI (ambiguous)}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: gene associated=Tiso_gene_7142}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: in pathway=PWY-6287}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:29, 21 March 2018

Reaction RXN-8022

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):
    • Crtlb
    • phytoene desaturase (ambiguous)
    • 2-step phytoene desaturase (ambiguous)
    • two-step phytoene desaturase (ambiguous)
    • CrtI (ambiguous)

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-ζ-carotene[c] + 1 an oxidized electron acceptor[c] => 1 a reduced electron acceptor[c] + 1 all-trans neurosporene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6287, neurosporene biosynthesis: PWY-6287
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-8022&oldid=41895"