Difference between revisions of "Tiso gene 10567"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCERONE-KINASE-RXN GLYCERONE-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** -dihy...")
(Created page with "Category:Gene == Gene Tiso_gene_10567 == * right end position: ** 3279 * transcription direction: ** NEGATIVE * left end position: ** 387 * centisome position: ** 4.582593...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCERONE-KINASE-RXN GLYCERONE-KINASE-RXN] ==
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== Gene Tiso_gene_10567 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3279
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* common name:
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* transcription direction:
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** -dihydroxy-2-butanone_kinase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.7.1.29 EC-2.7.1.29]
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** 387
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* centisome position:
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** 4.5825934   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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** 1 [[DIHYDROXYACETONE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[ADP]][c]
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* With common name(s):
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** 1 dihydroxyacetone[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 glycerone phosphate[c] '''+''' 1 ADP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14441]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6131]], glycerol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6131 PWY-6131]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3279}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15773 15773]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=387}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01011 R01011]
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{{#set: centisome position=4.5825934    }}
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* UNIPROT:
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{{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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** [http://www.uniprot.org/uniprot/P43550 P43550]
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** [http://www.uniprot.org/uniprot/O13902 O13902]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=-dihydroxy-2-butanone_kinase}}
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{{#set: ec number=EC-2.7.1.29}}
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{{#set: gene associated=Tiso_gene_14441}}
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{{#set: in pathway=PWY-6131|P185-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:29, 21 March 2018

Gene Tiso_gene_10567

  • right end position:
    • 3279
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 387
  • centisome position:
    • 4.5825934
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10567&oldid=41896"