Difference between revisions of "Tiso gene 13325"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCERONE-KINASE-RXN GLYCERONE-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** -dihy...")
(Created page with "Category:Gene == Gene Tiso_gene_13325 == * right end position: ** 3499 * transcription direction: ** POSITIVE * left end position: ** 11 * centisome position: ** 0.1725490...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCERONE-KINASE-RXN GLYCERONE-KINASE-RXN] ==
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== Gene Tiso_gene_13325 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3499
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* common name:
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* transcription direction:
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** -dihydroxy-2-butanone_kinase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.7.1.29 EC-2.7.1.29]
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** 11
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* centisome position:
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** 0.17254902   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[DIHYDROXYACETONE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[ADP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 ATP[c] '''+''' 1 dihydroxyacetone[c] '''=>''' 1 H+[c] '''+''' 1 glycerone phosphate[c] '''+''' 1 ADP[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* Gene: [[Tiso_gene_14441]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12196]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN0-5462]]
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== Pathways  ==
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* [[PWY-6131]], glycerol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6131 PWY-6131]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3499}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15773 15773]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=11}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01011 R01011]
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{{#set: centisome position=0.17254902    }}
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* UNIPROT:
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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** [http://www.uniprot.org/uniprot/P43550 P43550]
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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** [http://www.uniprot.org/uniprot/O13902 O13902]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=-dihydroxy-2-butanone_kinase}}
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{{#set: ec number=EC-2.7.1.29}}
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{{#set: gene associated=Tiso_gene_14441}}
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{{#set: in pathway=PWY-6131|P185-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:29, 21 March 2018

Gene Tiso_gene_13325

  • right end position:
    • 3499
  • transcription direction:
    • POSITIVE
  • left end position:
    • 11
  • centisome position:
    • 0.17254902
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13325&oldid=41912"