Difference between revisions of "SUCSYN-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13908 RXN-13908] == * direction: ** LEFT-TO-RIGHT * common name: ** transcriptional_coactivator...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TA...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13908 RXN-13908] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
−
** transcriptional_coactivator_pterin_dehydratase
+
** sucrose biosynthesis I (from photosynthesis)
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/4.2.1.96 EC-4.2.1.96]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** sucrose biosynthesis I (from Calvin cycle intermediates)
 +
** sucrose biosynthesis I
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''7''' reactions found over '''9''' reactions in the full pathway
−
** 1 [[CPD-14931]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[10-FORMYL-DIHYDROFOLATE-GLU-N]][c]
+
* [[F16ALDOLASE-RXN]]
−
* With common name(s):
+
** 6 associated gene(s):
−
** 1 a 10-formyltetrahydrofolate-4a-carbinolamine[c] '''=>''' 1 H2O[c] '''+''' 1 an N10-formyldihydrofolate[c]
+
*** [[Tiso_gene_12272]]
−
 
+
*** [[Tiso_gene_65]]
−
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_9119]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Tiso_gene_14568]]
−
* [[Tiso_gene_14844]]
+
*** [[Tiso_gene_9179]]
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_9118]]
−
***EC-NUMBER
+
** 5 reconstruction source(s) associated:
−
* [[Tiso_gene_14845]]
+
*** [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** [[manual-primary_network]]
−
***EC-NUMBER
+
*** [[orthology-creinhardtii]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[orthology-esiliculosus]]
−
== Pathways  ==
+
*** [[annotation-experimental_annotation]]
−
* [[PWY-7158]], L-phenylalanine degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7158 PWY-7158]
+
* [[F16BDEPHOS-RXN]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** 7 associated gene(s):
−
== Reconstruction information  ==
+
*** [[Tiso_gene_15398]]
−
* [[orthology]]:
+
*** [[Tiso_gene_9435]]
−
** [[pantograph]]:
+
*** [[Tiso_gene_16502]]
−
*** [[esiliculosus]]
+
*** [[Tiso_gene_4905]]
−
* [[annotation]]:
+
*** [[Tiso_gene_8226]]
−
** [[pathwaytools]]:
+
*** [[Tiso_gene_4904]]
−
*** [[in-silico_annotation]]
+
*** [[Tiso_gene_3483]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[GAPOXNPHOSPHN-RXN]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_20000]]
 +
*** [[Tiso_gene_235]]
 +
*** [[Tiso_gene_10646]]
 +
*** [[Tiso_gene_3344]]
 +
*** [[Tiso_gene_6766]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[PGLUCISOM-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_19480]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[PHOSGLYPHOS-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_3526]]
 +
*** [[Tiso_gene_18264]]
 +
*** [[Tiso_gene_3527]]
 +
*** [[Tiso_gene_18263]]
 +
*** [[Tiso_gene_12104]]
 +
*** [[Tiso_gene_14642]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[PWY-7343]]
 +
** 0 associated gene:
 +
* [[SUCROSE-PHOSPHATE-SYNTHASE-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_14247]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATASE-RXN SUCROSE-PHOSPHATASE-RXN]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* PLANTCYC : SUCSYN-PWY
−
{{#set: common name=transcriptional_coactivator_pterin_dehydratase}}
+
* METACYC:
−
{{#set: ec number=EC-4.2.1.96}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=SUCSYN-PWY SUCSYN-PWY]
−
{{#set: gene associated=Tiso_gene_14844|Tiso_gene_14845}}
+
* ARACYC:
−
{{#set: in pathway=PWY-7158}}
+
** [http://metacyc.org/ARA/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY]
−
{{#set: reconstruction category=orthology}}
+
{{#set: taxonomic range=TAX-1117}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: taxonomic range=TAX-33090}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: common name=sucrose biosynthesis I (from photosynthesis)}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: common name=sucrose biosynthesis I (from Calvin cycle intermediates)|sucrose biosynthesis I}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reaction found=7}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: total reaction=9}}
 +
{{#set: completion rate=78.0}}

Latest revision as of 19:29, 21 March 2018

Pathway SUCSYN-PWY

  • taxonomic range:
  • common name:
    • sucrose biosynthesis I (from photosynthesis)
  • Synonym(s):
    • sucrose biosynthesis I (from Calvin cycle intermediates)
    • sucrose biosynthesis I

Reaction(s) found

7 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=SUCSYN-PWY&oldid=41966"