Difference between revisions of "HOMOSERDEHYDROG-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE--TRNA-LIGASE-RXN CYSTEINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERDEHYDROG-RXN HOMOSERDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** homoser...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE--TRNA-LIGASE-RXN CYSTEINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERDEHYDROG-RXN HOMOSERDEHYDROG-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** cysteinyl-trna
+
** homoserine_dehydrogenase
−
** cysteine--trna_ligase
+
** related_to_met2-homoserine_o-acetyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.16 EC-6.1.1.16]
+
** [http://enzyme.expasy.org/EC/1.1.1.3 EC-1.1.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CYS]][c] '''+''' 1 [[CYS-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Charged-CYS-tRNAs]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[HOMO-SER]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-cysteine[c] '''+''' 1 a tRNAcys[c] '''+''' 1 ATP[c] '''=>''' 1 an L-cysteinyl-[tRNAcys][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
+
** 1 NAD(P)H[c] '''+''' 1 L-aspartate-semialdehyde[c] '''+''' 1 H+[c] '''=>''' 1 L-homoserine[c] '''+''' 1 NAD(P)+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10881]]
+
* Gene: [[Tiso_gene_5558]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
* Gene: [[Tiso_gene_1148]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_17657]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_4345]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERSYN-PWY HOMOSERSYN-PWY]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03650 R03650]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01773 R01773]
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01775 R01775]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9PPB8 Q9PPB8]
+
** [http://www.uniprot.org/uniprot/P44505 P44505]
−
** [http://www.uniprot.org/uniprot/Q06752 Q06752]
+
** [http://www.uniprot.org/uniprot/Q58997 Q58997]
−
** [http://www.uniprot.org/uniprot/P43816 P43816]
+
** [http://www.uniprot.org/uniprot/P27725 P27725]
−
** [http://www.uniprot.org/uniprot/O29836 O29836]
+
** [http://www.uniprot.org/uniprot/O67677 O67677]
−
** [http://www.uniprot.org/uniprot/Q9CEJ0 Q9CEJ0]
+
** [http://www.uniprot.org/uniprot/P19582 P19582]
−
** [http://www.uniprot.org/uniprot/O58370 O58370]
+
** [http://www.uniprot.org/uniprot/P00561 P00561]
−
** [http://www.uniprot.org/uniprot/O83129 O83129]
+
** [http://www.uniprot.org/uniprot/P00562 P00562]
−
** [http://www.uniprot.org/uniprot/Q9ZE62 Q9ZE62]
+
** [http://www.uniprot.org/uniprot/P08499 P08499]
−
** [http://www.uniprot.org/uniprot/Q9ZKW6 Q9ZKW6]
+
** [http://www.uniprot.org/uniprot/Q9JR84 Q9JR84]
−
** [http://www.uniprot.org/uniprot/Q9WZH8 Q9WZH8]
+
** [http://www.uniprot.org/uniprot/Q9PIX8 Q9PIX8]
−
** [http://www.uniprot.org/uniprot/P41259 P41259]
+
** [http://www.uniprot.org/uniprot/P56429 P56429]
−
** [http://www.uniprot.org/uniprot/O51545 O51545]
+
** [http://www.uniprot.org/uniprot/O27300 O27300]
−
** [http://www.uniprot.org/uniprot/Q9Z6X4 Q9Z6X4]
+
** [http://www.uniprot.org/uniprot/Q9CGD8 Q9CGD8]
−
** [http://www.uniprot.org/uniprot/O67163 O67163]
+
** [http://www.uniprot.org/uniprot/P52985 P52985]
−
** [http://www.uniprot.org/uniprot/Q9JWJ3 Q9JWJ3]
+
** [http://www.uniprot.org/uniprot/P31116 P31116]
−
** [http://www.uniprot.org/uniprot/P47495 P47495]
+
** [http://www.uniprot.org/uniprot/P37142 P37142]
−
** [http://www.uniprot.org/uniprot/P75423 P75423]
+
** [http://www.uniprot.org/uniprot/Q9SA18 Q9SA18]
−
** [http://www.uniprot.org/uniprot/P74330 P74330]
+
** [http://www.uniprot.org/uniprot/P52986 P52986]
−
** [http://www.uniprot.org/uniprot/Q9UWP2 Q9UWP2]
+
** [http://www.uniprot.org/uniprot/P49079 P49079]
−
** [http://www.uniprot.org/uniprot/P21888 P21888]
+
** [http://www.uniprot.org/uniprot/P49080 P49080]
 +
** [http://www.uniprot.org/uniprot/P93402 P93402]
 +
** [http://www.uniprot.org/uniprot/O81852 O81852]
 +
** [http://www.uniprot.org/uniprot/O63067 O63067]
 +
** [http://www.uniprot.org/uniprot/O65027 O65027]
 +
** [http://www.uniprot.org/uniprot/P46806 P46806]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=cysteinyl-trna}}
+
{{#set: common name=homoserine_dehydrogenase}}
−
{{#set: common name=cysteine--trna_ligase}}
+
{{#set: common name=related_to_met2-homoserine_o-acetyltransferase}}
−
{{#set: ec number=EC-6.1.1.16}}
+
{{#set: ec number=EC-1.1.1.3}}
−
{{#set: gene associated=Tiso_gene_10881|Tiso_gene_17657}}
+
{{#set: gene associated=Tiso_gene_5558|Tiso_gene_1148|Tiso_gene_4345}}
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
{{#set: in pathway=HOMOSERSYN-PWY}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:29, 21 March 2018

Reaction HOMOSERDEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • homoserine_dehydrogenase
    • related_to_met2-homoserine_o-acetyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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