Difference between revisions of "RXN-11921"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11921 RXN-11921] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-methylcrotonyl-CoA:acetyl...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11921 RXN-11921] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
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* common name:
 
* common name:
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** L-isoleucine biosynthesis IV
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** 3-methylcrotonyl-CoA:acetyl-CoA C-acyltransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
 
* Synonym(s):
 
* Synonym(s):
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** 5-methyl-3-oxo-4-hexenoyl-CoA thiolase
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[ACETOOHBUTSYN-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[CPD-12906]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[3-METHYL-CROTONYL-COA]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_11362]]
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** 1 coenzyme A[c] '''+''' 1 5-methyl-3-oxo-4-hexenoyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 3-methylcrotonyl-CoA[c]
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** 2 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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* Gene: [[Tiso_gene_16181]]
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** 3 associated gene(s):
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** Source: [[orthology-athaliana]]
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*** [[Tiso_gene_14984]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_18403]]
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== Pathways  ==
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*** [[Tiso_gene_17748]]
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* [[PWY-6672]], cis-genanyl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672]
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** 7 reconstruction source(s) associated:
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** '''4''' reactions found over '''9''' reactions in the full pathway
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*** [[annotation-experimental_annotation]]
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== Reconstruction information  ==
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*** [[orthology-esiliculosus]]
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* Category: [[orthology]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-athaliana]]
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*** [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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*** [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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*** [[manual-primary_network]]
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*** Tool: [[pantograph]]
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*** [[orthology-creinhardtii]]
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* [[DIHYDROXYMETVALDEHYDRAT-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_1563]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOBUTYRATE-SYNTHASE-RXN 2-OXOBUTYRATE-SYNTHASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PROPIONATE--COA-LIGASE-RXN PROPIONATE--COA-LIGASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16062 RXN-16062]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-224756}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08095 R08095]
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{{#set: taxonomic range=TAX-183925}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=L-isoleucine biosynthesis IV}}
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{{#set: common name=3-methylcrotonyl-CoA:acetyl-CoA C-acyltransferase}}
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{{#set: reaction found=3}}
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{{#set: ec number=EC-2.3.1}}
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{{#set: total reaction=6}}
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{{#set: common name=5-methyl-3-oxo-4-hexenoyl-CoA thiolase}}
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{{#set: completion rate=50.0}}
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{{#set: gene associated=Tiso_gene_16181}}
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{{#set: in pathway=PWY-6672}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:30, 21 March 2018

Reaction RXN-11921

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-methylcrotonyl-CoA:acetyl-CoA C-acyltransferase
  • ec number:
  • Synonym(s):
    • 5-methyl-3-oxo-4-hexenoyl-CoA thiolase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6672, cis-genanyl-CoA degradation: PWY-6672
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11921&oldid=42011"