Difference between revisions of "RXN-11921"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8389 RXN-8389] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_acyl-acp_desatura...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11921 RXN-11921] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-methylcrotonyl-CoA:acetyl...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8389 RXN-8389] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11921 RXN-11921] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** chloroplast_acyl-acp_desaturase
+
** 3-methylcrotonyl-CoA:acetyl-CoA C-acyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.19.2 EC-1.14.19.2]
+
** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
 
* Synonym(s):
 
* Synonym(s):
 +
** 5-methyl-3-oxo-4-hexenoyl-CoA thiolase
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Palmitoyl-ACPs]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[Palmitoleoyl-ACPs]][c] '''+''' 2 [[WATER]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
+
** 1 [[CO-A]][c] '''+''' 1 [[CPD-12906]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[3-METHYL-CROTONYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a palmitoyl-[acp][c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 oxygen[c] '''+''' 2 H+[c] '''=>''' 1 a palmitoleoyl-[acp][c] '''+''' 2 H2O[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
+
** 1 coenzyme A[c] '''+''' 1 5-methyl-3-oxo-4-hexenoyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 3-methylcrotonyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_6179]]
+
* Gene: [[Tiso_gene_16181]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-athaliana]]
−
*** Assignment: EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5366]], palmitoleate biosynthesis II (plants and bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5366 PWY-5366]
+
* [[PWY-6672]], cis-genanyl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[manual]]
+
* Category: [[orthology]]
−
** Source: [[manual-primary_network]]
+
** Source: [[orthology-athaliana]]
−
* Category: [[annotation]]
+
*** Tool: [[pantograph]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-esiliculosus]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R08095 R08095]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=chloroplast_acyl-acp_desaturase}}
+
{{#set: common name=3-methylcrotonyl-CoA:acetyl-CoA C-acyltransferase}}
−
{{#set: ec number=EC-1.14.19.2}}
+
{{#set: ec number=EC-2.3.1}}
−
{{#set: gene associated=Tiso_gene_6179}}
+
{{#set: common name=5-methyl-3-oxo-4-hexenoyl-CoA thiolase}}
−
{{#set: in pathway=PWY-5366}}
+
{{#set: gene associated=Tiso_gene_16181}}
−
{{#set: reconstruction category=manual|annotation}}
+
{{#set: in pathway=PWY-6672}}
−
{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:30, 21 March 2018

Reaction RXN-11921

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-methylcrotonyl-CoA:acetyl-CoA C-acyltransferase
  • ec number:
  • Synonym(s):
    • 5-methyl-3-oxo-4-hexenoyl-CoA thiolase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6672, cis-genanyl-CoA degradation: PWY-6672
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11921&oldid=42011"