Difference between revisions of "RXN-5061"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11057 RXN-11057] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5061 RXN-5061] == * direction: ** LEFT-TO-RIGHT * common name: ** methylenetetrahydrofolate_red...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5061 RXN-5061] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** methylenetetrahydrofolate_reductase (ferredoxin) | ||
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/1. | + | ** [http://enzyme.expasy.org/EC/1.5.7.1 EC-1.5.7.1] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** | + | ** 2 [[PROTON]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[5-METHYL-THF-GLU-N]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** 2 H+[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 an N5-methyl-tetrahydrofolate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_4806]] |
| − | ** [[ | + | ** Source: [[annotation-experimental_annotation]] |
| + | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| − | * [[PWY- | + | * [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201] |
| − | ** ''' | + | ** '''7''' reactions found over '''12''' reactions in the full pathway |
| + | * [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY] | ||
| + | ** '''5''' reactions found over '''9''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[ | + | * Category: [[annotation]] |
| − | ** [[ | + | ** Source: [[annotation-experimental_annotation]] |
| − | *** [[ | + | *** Tool: [[pathwaytools]] |
== External links == | == External links == | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R01217 R01217] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: ec number=EC-1. | + | {{#set: common name=methylenetetrahydrofolate_reductase (ferredoxin)}} |
| − | {{#set: gene associated= | + | {{#set: ec number=EC-1.5.7.1}} |
| − | {{#set: in pathway=PWY- | + | {{#set: gene associated=Tiso_gene_4806}} |
| − | {{#set: reconstruction category= | + | {{#set: in pathway=PWY-2201|CODH-PWY}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction category=annotation}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction source=annotation-experimental_annotation}} |
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 19:30, 21 March 2018
Contents
Reaction RXN-5061
- direction:
- LEFT-TO-RIGHT
- common name:
- methylenetetrahydrofolate_reductase (ferredoxin)
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 2 PROTON[c] + 1 METHYLENE-THF-GLU-N[c] + 2 Reduced-ferredoxins[c] => 2 Oxidized-ferredoxins[c] + 1 5-METHYL-THF-GLU-N[c]
- With common name(s):
- 2 H+[c] + 1 a 5,10-methylene-tetrahydrofolate[c] + 2 a reduced ferredoxin [iron-sulfur] cluster[c] => 2 an oxidized ferredoxin [iron-sulfur] cluster[c] + 1 an N5-methyl-tetrahydrofolate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_4806
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
Pathways
- PWY-2201, folate transformations I: PWY-2201
- 7 reactions found over 12 reactions in the full pathway
- CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): CODH-PWY
- 5 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links
- LIGAND-RXN:
