Difference between revisions of "Tiso gene 11913"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11057 RXN-11057] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Gene == Gene Tiso_gene_11913 == * right end position: ** 7187 * transcription direction: ** POSITIVE * left end position: ** 6005 * centisome position: ** 80.8754...")
 
(4 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11057 RXN-11057] ==
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== Gene Tiso_gene_11913 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 7187
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.14.1 EC-1.14.14.1]
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** POSITIVE
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* left end position:
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** 6005
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* centisome position:
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** 80.87542   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-11839]]
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** 1 [[N-ACETYL-5-METHOXY-TRYPTAMINE]][c] '''+''' 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[FORMALDEHYDE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[N-ACETYL-SEROTONIN]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 melatonin[c] '''+''' 1 a reduced [NADPH-hemoprotein reductase][c] '''+''' 1 oxygen[c] '''=>''' 1 an oxidized [NADPH-hemoprotein reductase][c] '''+''' 1 formaldehyde[c] '''+''' 1 H2O[c] '''+''' 1 N-acetyl-serotonin[c]
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* Reaction: [[RXN-11840]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-11841]]
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* [[Tiso_gene_1035]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: automated-name-match
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== Pathways  ==
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* Reaction: [[RXN-11842]]
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* [[PWY-6398]], melatonin degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6398 PWY-6398]
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** Source: [[annotation-in-silico_annotation]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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*** Assignment: automated-name-match
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== Reconstruction information  ==
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* Reaction: [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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* [[orthology]]:
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]:
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*** Assignment: automated-name-match
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*** [[esiliculosus]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=7187}}
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{{#set: ec number=EC-1.14.14.1}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: gene associated=Tiso_gene_1035}}
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{{#set: left end position=6005}}
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{{#set: in pathway=PWY-6398}}
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{{#set: centisome position=80.87542    }}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction associated=RXN-11839|RXN-11840|RXN-11841|RXN-11842|TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Latest revision as of 20:30, 21 March 2018

Gene Tiso_gene_11913

  • right end position:
    • 7187
  • transcription direction:
    • POSITIVE
  • left end position:
    • 6005
  • centisome position:
    • 80.87542
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11913&oldid=42062"