Difference between revisions of "PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12363 RXN-12363] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY] == * taxonomic range: ** [http...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12363 RXN-12363] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** ORF
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** protocatechuate degradation II (ortho-cleavage pathway)
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.84 EC-2.3.1.84]
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* Synonym(s):
 
* Synonym(s):
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** protocatechuate branch of the 3-oxoadipate pathway
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** protocatechuate branch of the 3-ketoadipate pathway
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** protocatechuate branch of the β-ketoadipate pathway
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** protocatechuate degradation via ortho-cleavage
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** protocatechuate degradation via the β-ketoadipate pathway
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** protocatechuate 3,4-cleavage
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''4''' reactions in the full pathway
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** 1 [[ETOH]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[ETHYLACETATE]][c]
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* [[3-OXOADIPATE-ENOL-LACTONASE-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 ethanol[c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 ethyl acetate[c]
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*** [[Tiso_gene_10066]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* [[Tiso_gene_10528]]
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* [http://metacyc.org/META/NEW-IMAGE?object=4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN 4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN]
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=5.5.1.2-RXN 5.5.1.2-RXN]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-34-DIOXYGENASE-RXN PROTOCATECHUATE-34-DIOXYGENASE-RXN]
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== Pathways  ==
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* [[PWY-6801]], volatile esters biosynthesis (during fruit ripening): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6801 PWY-6801]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=ORF}}
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{{#set: common name=protocatechuate degradation II (ortho-cleavage pathway)}}
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{{#set: ec number=EC-2.3.1.84}}
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{{#set: common name=protocatechuate branch of the 3-oxoadipate pathway|protocatechuate branch of the 3-ketoadipate pathway|protocatechuate branch of the β-ketoadipate pathway|protocatechuate degradation via ortho-cleavage|protocatechuate degradation via the β-ketoadipate pathway|protocatechuate 3,4-cleavage}}
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{{#set: gene associated=Tiso_gene_10528}}
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{{#set: reaction found=1}}
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{{#set: in pathway=PWY-6801}}
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{{#set: total reaction=4}}
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{{#set: reconstruction category=annotation}}
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{{#set: completion rate=25.0}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:30, 21 March 2018

Pathway PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY

  • taxonomic range:
  • common name:
    • protocatechuate degradation II (ortho-cleavage pathway)
  • Synonym(s):
    • protocatechuate branch of the 3-oxoadipate pathway
    • protocatechuate branch of the 3-ketoadipate pathway
    • protocatechuate branch of the β-ketoadipate pathway
    • protocatechuate degradation via ortho-cleavage
    • protocatechuate degradation via the β-ketoadipate pathway
    • protocatechuate 3,4-cleavage

Reaction(s) found

1 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY&oldid=42066"