Difference between revisions of "CPD1F-98"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-NH3-RXN GMP-SYN-NH3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamine_amido...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-98 CPD1F-98] == * smiles: ** CC(=CCCC(=CCCC(=CC=CC(=CC=CC=C(C=CC=C(CCC=C(CCC=C(C)C)C)C)C)...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-NH3-RXN GMP-SYN-NH3-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-98 CPD1F-98] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(=CCCC(=CCCC(=CC=CC(=CC=CC=C(C=CC=C(CCC=C(CCC=C(C)C)C)C)C)C)C)C)C
 
* common name:
 
* common name:
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** glutamine_amidotransferase
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** all-trans-ζ-carotene
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* inchi key:
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** InChIKey=BIWLELKAFXRPDE-WTXAYMOSSA-N
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* molecular weight:
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** 540.914   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-8022]]
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** 1 [[AMMONIUM]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c]
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* [[R95]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 ammonium[c] '''+''' 1 XMP[c] '''+''' 1 ATP[c] '''=>''' 1 GMP[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 2 H+[c]
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* [[R94]]
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* [[RXN-8024]]
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== Genes associated with this reaction  ==
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== Reaction(s) of unknown directionality ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6657]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* LIPID_MAPS : LMPR01070256
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18301 18301]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5280788 5280788]
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** [http://www.genome.jp/dbget-bin/www_bget?R01230 R01230]
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C05430 C05430]
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{{#set: common name=glutamine_amidotransferase}}
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* CHEMSPIDER:
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{{#set: gene associated=Tiso_gene_6657}}
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** [http://www.chemspider.com/Chemical-Structure.4444346.html 4444346]
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{{#set: in pathway=}}
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* CHEBI:
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{{#set: reconstruction category=orthology|annotation}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=28068 28068]
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{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation}}
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* METABOLIGHTS : MTBLC28068
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: smiles=CC(=CCCC(=CCCC(=CC=CC(=CC=CC=C(C=CC=C(CCC=C(CCC=C(C)C)C)C)C)C)C)C)C}}
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{{#set: common name=all-trans-ζ-carotene}}
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{{#set: inchi key=InChIKey=BIWLELKAFXRPDE-WTXAYMOSSA-N}}
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{{#set: molecular weight=540.914    }}
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{{#set: consumed by=RXN-8022|R95}}
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{{#set: produced by=R94|RXN-8024}}

Latest revision as of 19:30, 21 March 2018

Metabolite CPD1F-98

  • smiles:
    • CC(=CCCC(=CCCC(=CC=CC(=CC=CC=C(C=CC=C(CCC=C(CCC=C(C)C)C)C)C)C)C)C)C
  • common name:
    • all-trans-ζ-carotene
  • inchi key:
    • InChIKey=BIWLELKAFXRPDE-WTXAYMOSSA-N
  • molecular weight:
    • 540.914
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD1F-98&oldid=42077"