Difference between revisions of "P321-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13603 RXN-13603] == * direction: ** LEFT-TO-RIGHT * common name: ** neolinustatin β-digluc...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P321-PWY P321-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13603 RXN-13603] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P321-PWY P321-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** neolinustatin β-diglucosidase
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** benzoyl-CoA degradation III (anaerobic)
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** beta-glucosidase-like_chloroplastic
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** low_quality_protein:_beta-glucosidase-like_chloroplastic-like
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** ORF
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** beta_glucosidase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
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* Synonym(s):
 
* Synonym(s):
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** anaerobic benzoyl-CoA degradation
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''9''' reactions in the full pathway
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** 1 [[CPD-14596]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[CPD-10277]][c]
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* [[RXN-8032]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 neolinustatin[c] '''+''' 1 H2O[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 lotaustralin[c]
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*** [[Tiso_gene_7195]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_6187]]
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== Reaction(s) not found ==
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.259-RXN 1.1.1.259-RXN]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=1.3.1.62-RXN 1.3.1.62-RXN]
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** EXPERIMENTAL_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=1.3.99.15-RXN 1.3.99.15-RXN]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=R265-RXN R265-RXN]
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* [[Tiso_gene_10001]]
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* [http://metacyc.org/META/NEW-IMAGE?object=R266-RXN R266-RXN]
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** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=R267-RXN R267-RXN]
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* [[Tiso_gene_3467]]
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* [http://metacyc.org/META/NEW-IMAGE?object=R268-RXN R268-RXN]
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8031 RXN-8031]
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6007]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15066]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13305]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5836]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2344]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2843]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15067]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_8669]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6497]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6188]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13306]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7092]], neolinustatin bioactivation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7092 PWY-7092]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* UM-BBD-PWY : benz
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{{#set: common name=neolinustatin β-diglucosidase}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=beta-glucosidase-like_chloroplastic}}
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{{#set: common name=benzoyl-CoA degradation III (anaerobic)}}
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{{#set: common name=low_quality_protein:_beta-glucosidase-like_chloroplastic-like}}
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{{#set: common name=anaerobic benzoyl-CoA degradation}}
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{{#set: common name=ORF}}
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{{#set: reaction found=1}}
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{{#set: common name=beta_glucosidase}}
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{{#set: total reaction=9}}
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{{#set: ec number=EC-3.2.1.21}}
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{{#set: completion rate=11.0}}
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{{#set: gene associated=Tiso_gene_6187|Tiso_gene_10001|Tiso_gene_3467|Tiso_gene_6007|Tiso_gene_15066|Tiso_gene_13305|Tiso_gene_5836|Tiso_gene_2344|Tiso_gene_2843|Tiso_gene_15067|Tiso_gene_8669|Tiso_gene_6497|Tiso_gene_6188|Tiso_gene_13306}}
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{{#set: in pathway=PWY-7092}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:31, 21 March 2018

Pathway P321-PWY

  • taxonomic range:
  • common name:
    • benzoyl-CoA degradation III (anaerobic)
  • Synonym(s):
    • anaerobic benzoyl-CoA degradation

Reaction(s) found

1 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

  • UM-BBD-PWY : benz




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