Difference between revisions of "PWY-6387"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5408 RXN0-5408] == * direction: ** LEFT-TO-RIGHT * common name: ** myo-inositol-1(or_4)-monoph...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6387 PWY-6387] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5408 RXN0-5408] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6387 PWY-6387] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** myo-inositol-1(or_4)-monophosphatase
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** UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.3.25 EC-3.1.3.25]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''8''' reactions in the full pathway
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** 1 [[D-MYO-INOSITOL-1-MONOPHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MYO-INOSITOL]][c] '''+''' 1 [[Pi]][c]
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* [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
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* With common name(s):
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** 18 associated gene(s):
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** 1 1D-myo-inositol 1-monophosphate[c] '''+''' 1 H2O[c] '''=>''' 1 myo-inositol[c] '''+''' 1 phosphate[c]
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*** [[Tiso_gene_4659]]
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*** [[Tiso_gene_12058]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_5194]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_4661]]
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* Gene: [[Tiso_gene_12601]]
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*** [[Tiso_gene_210]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_6635]]
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* Gene: [[Tiso_gene_2527]]
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*** [[Tiso_gene_5195]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_2120]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_6787]]
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_7079]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_14132]]
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* Gene: [[Tiso_gene_4855]]
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*** [[Tiso_gene_2121]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_2119]]
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* Gene: [[Tiso_gene_10754]]
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*** [[Tiso_gene_8778]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_14187]]
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* Gene: [[Tiso_gene_14713]]
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*** [[Tiso_gene_7380]]
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** Source: [[orthology-creinhardtii]]
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*** [[Tiso_gene_12685]]
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* Gene: [[Tiso_gene_11614]]
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*** [[Tiso_gene_18014]]
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** Source: [[orthology-athaliana]]
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** 2 reconstruction source(s) associated:
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** Source: [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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== Pathways  ==
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== Reaction(s) not found ==
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* [[PWY-4702]], phytate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4702 PWY-4702]
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* [http://metacyc.org/META/NEW-IMAGE?object=DALADALALIG-RXN DALADALALIG-RXN]
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** '''2''' reactions found over '''14''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUTRACE-RXN GLUTRACE-RXN]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=UDP-NACMUR-ALA-LIG-RXN UDP-NACMUR-ALA-LIG-RXN]
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* Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=UDP-NACMURALA-GLU-LIG-RXN UDP-NACMURALA-GLU-LIG-RXN]
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** Source: [[orthology-athaliana]]
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* [http://metacyc.org/META/NEW-IMAGE?object=UDP-NACMURALGLDAPAALIG-RXN UDP-NACMURALGLDAPAALIG-RXN]
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*** Tool: [[pantograph]]
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* [http://metacyc.org/META/NEW-IMAGE?object=UDP-NACMURALGLDAPLIG-RXN UDP-NACMURALGLDAPLIG-RXN]
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** Source: [[orthology-creinhardtii]]
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* [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLGLUCOSAMENOLPYRTRANS-RXN UDPNACETYLGLUCOSAMENOLPYRTRANS-RXN]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27670 27670]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6387 PWY-6387]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01185 R01185]
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{{#set: common name=UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=1}}
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{{#set: common name=myo-inositol-1(or_4)-monophosphatase}}
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{{#set: total reaction=8}}
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{{#set: ec number=EC-3.1.3.25}}
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{{#set: completion rate=13.0}}
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{{#set: gene associated=Tiso_gene_12601|Tiso_gene_2527|Tiso_gene_4855|Tiso_gene_10754|Tiso_gene_14713|Tiso_gene_11614}}
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{{#set: in pathway=PWY-4702}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:31, 21 March 2018

Pathway PWY-6387

  • taxonomic range:
  • common name:
    • UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
  • Synonym(s):

Reaction(s) found

1 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6387&oldid=42139"