Difference between revisions of "2.6.1.22-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6164 PWY-6164] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-30...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.6.1.22-RXN 2.6.1.22-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/...")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6164 PWY-6164] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.6.1.22-RXN 2.6.1.22-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
+
** REVERSIBLE
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
+
* ec number:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-287987 TAX-287987]
+
** [http://enzyme.expasy.org/EC/2.6.1.22 EC-2.6.1.22]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5204 TAX-5204]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2836 TAX-2836]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4762 TAX-4762]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4890 TAX-4890]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5794 TAX-5794]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
−
* common name:
+
−
** 3-dehydroquinate biosynthesis I
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''2''' reactions found over '''2''' reactions in the full pathway
+
* With identifiers:
−
* [[3-DEHYDROQUINATE-SYNTHASE-RXN]]
+
** 1 [[CPD-466]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[CH3-MALONATE-S-ALD]][c]
−
** 6 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_5752]]
+
** 1 (S)-3-amino-2-methylpropanoate[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 (S)-methylmalonate-semialdehyde[c]
−
*** [[Tiso_gene_3974]]
+
 
−
*** [[Tiso_gene_3447]]
+
== Genes associated with this reaction  ==
−
*** [[Tiso_gene_5753]]
+
== Pathways  ==
−
*** [[Tiso_gene_3445]]
+
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
−
*** [[Tiso_gene_3446]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
** 6 reconstruction source(s) associated:
+
== Reconstruction information  ==
−
*** [[orthology-esiliculosus]]
+
* Category: [[annotation]]
−
*** [[annotation-in-silico_annotation]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[orthology-athaliana]]
+
*** Tool: [[pathwaytools]]
−
*** [[orthology-synechocystis]]
+
** Source: [[annotation-experimental_annotation]]
−
*** [[manual-primary_network]]
+
*** Tool: [[pathwaytools]]
−
*** [[orthology-creinhardtii]]
+
−
* [[DAHPSYN-RXN]]
+
−
** 5 associated gene(s):
+
−
*** [[Tiso_gene_18937]]
+
−
*** [[Tiso_gene_18975]]
+
−
*** [[Tiso_gene_7372]]
+
−
*** [[Tiso_gene_8935]]
+
−
*** [[Tiso_gene_8934]]
+
−
** 6 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[manual-primary_network]]
+
−
*** [[orthology-creinhardtii]]
+
−
== Reaction(s) not found ==
+
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
+
* RHEA:
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6164 PWY-6164]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13993 13993]
−
{{#set: taxonomic range=TAX-3041}}
+
* LIGAND-RXN:
−
{{#set: taxonomic range=TAX-2763}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04188 R04188]
−
{{#set: taxonomic range=TAX-287987}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: taxonomic range=TAX-5204}}
+
{{#set: ec number=EC-2.6.1.22}}
−
{{#set: taxonomic range=TAX-2836}}
+
{{#set: in pathway=VALDEG-PWY}}
−
{{#set: taxonomic range=TAX-4762}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: taxonomic range=TAX-4890}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
−
{{#set: taxonomic range=TAX-5794}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: taxonomic range=TAX-33090}}
+
−
{{#set: taxonomic range=TAX-2}}
+
−
{{#set: common name=3-dehydroquinate biosynthesis I}}
+
−
{{#set: reaction found=2}}
+
−
{{#set: total reaction=2}}
+
−
{{#set: completion rate=100.0}}
+

Latest revision as of 19:31, 21 March 2018

Reaction 2.6.1.22-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-3-amino-2-methylpropanoate[c] + 1 2-oxoglutarate[c] <=> 1 L-glutamate[c] + 1 (S)-methylmalonate-semialdehyde[c]

Genes associated with this reaction

Pathways

  • VALDEG-PWY, L-valine degradation I: VALDEG-PWY
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=2.6.1.22-RXN&oldid=42162"