Difference between revisions of "RXN1G-248"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCINE--TRNA-LIGASE-RXN LEUCINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-248 RXN1G-248] == * direction: ** LEFT-TO-RIGHT * common name: ** trans-delta2-cis,cis-delta5...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCINE--TRNA-LIGASE-RXN LEUCINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-248 RXN1G-248] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** leucine--trna_ligase
+
** trans-delta2-cis,cis-delta5,23-C42:3-[acyl-carrier protein] reductase
−
** ORF
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.4 EC-6.1.1.4]
+
** [http://enzyme.expasy.org/EC/1.3.1.M4 EC-1.3.1.M4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[LEU-tRNAs]][c] '''+''' 1 [[LEU]][c] '''=>''' 1 [[Charged-LEU-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[trans-D2-cis-cis-D5-23-C42-3-ACPs]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[cis-cis-D5-23-C42-2-ACPs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 a tRNAleu[c] '''+''' 1 L-leucine[c] '''=>''' 1 an L-leucyl-[tRNAleu][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
+
** 1 a trans-delta2-cis,cis-delta5,23-C42:3-[acp][c] '''+''' 1 NADH[c] '''+''' 1 H+[c] '''=>''' 1 NAD+[c] '''+''' 1 a cis,cis-delta5,23-C42:2-[acp][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_11524]]
+
* Gene: [[Tiso_gene_10778]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15439]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''86''' reactions found over '''182''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11688 11688]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03657 R03657]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/O27552 O27552]
 
−
** [http://www.uniprot.org/uniprot/P56457 P56457]
 
−
** [http://www.uniprot.org/uniprot/O51267 O51267]
 
−
** [http://www.uniprot.org/uniprot/O83595 O83595]
 
−
** [http://www.uniprot.org/uniprot/O84211 O84211]
 
−
** [http://www.uniprot.org/uniprot/Q9Z930 Q9Z930]
 
−
** [http://www.uniprot.org/uniprot/P47508 P47508]
 
−
** [http://www.uniprot.org/uniprot/P36430 P36430]
 
−
** [http://www.uniprot.org/uniprot/O66680 O66680]
 
−
** [http://www.uniprot.org/uniprot/O67646 O67646]
 
−
** [http://www.uniprot.org/uniprot/Q9ZDB1 Q9ZDB1]
 
−
** [http://www.uniprot.org/uniprot/Q9WY15 Q9WY15]
 
−
** [http://www.uniprot.org/uniprot/Q9PNK3 Q9PNK3]
 
−
** [http://www.uniprot.org/uniprot/Q9JW39 Q9JW39]
 
−
** [http://www.uniprot.org/uniprot/Q9ZJ63 Q9ZJ63]
 
−
** [http://www.uniprot.org/uniprot/Q9JXT2 Q9JXT2]
 
−
** [http://www.uniprot.org/uniprot/P43827 P43827]
 
−
** [http://www.uniprot.org/uniprot/O58698 O58698]
 
−
** [http://www.uniprot.org/uniprot/Q9CHB6 Q9CHB6]
 
−
** [http://www.uniprot.org/uniprot/P26637 P26637]
 
−
** [http://www.uniprot.org/uniprot/P75398 P75398]
 
−
** [http://www.uniprot.org/uniprot/P73274 P73274]
 
−
** [http://www.uniprot.org/uniprot/Q48955 Q48955]
 
−
** [http://www.uniprot.org/uniprot/Q48964 Q48964]
 
−
** [http://www.uniprot.org/uniprot/Q49051 Q49051]
 
−
** [http://www.uniprot.org/uniprot/P11325 P11325]
 
−
** [http://www.uniprot.org/uniprot/P07813 P07813]
 
−
** [http://www.uniprot.org/uniprot/P10857 P10857]
 
−
** [http://www.uniprot.org/uniprot/P15181 P15181]
 
−
** [http://www.uniprot.org/uniprot/Q50192 Q50192]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=leucine--trna_ligase}}
+
{{#set: common name=trans-delta2-cis,cis-delta5,23-C42:3-[acyl-carrier protein] reductase}}
−
{{#set: common name=ORF}}
+
{{#set: ec number=EC-1.3.1.M4}}
−
{{#set: ec number=EC-6.1.1.4}}
+
{{#set: gene associated=Tiso_gene_10778}}
−
{{#set: gene associated=Tiso_gene_11524|Tiso_gene_15439}}
+
{{#set: in pathway=PWYG-321}}
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 19:31, 21 March 2018

Reaction RXN1G-248

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • trans-delta2-cis,cis-delta5,23-C42:3-[acyl-carrier protein] reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWYG-321, mycolate biosynthesis: PWYG-321
    • 86 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

"trans-delta2-cis,cis-delta5,23-C42:3-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN1G-248&oldid=42182"