Difference between revisions of "RXN-5466"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14926 CPD-14926] == * smiles: ** CC(C)CCCC(C)CCCC(C)CCCC(C)=C[CH]=O * common name: ** phyte...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5466 RXN-5466] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14926 CPD-14926] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5466 RXN-5466] ==
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* smiles:
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* direction:
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** CC(C)CCCC(C)CCCC(C)CCCC(C)=C[CH]=O
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** phytenal
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** [http://enzyme.expasy.org/EC/2.4.1.258 EC-2.4.1.258]
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* inchi key:
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** InChIKey=RAFZYSUICBQABU-PYDDKJGSSA-N
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* molecular weight:
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** 294.52   
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* Synonym(s):
 
* Synonym(s):
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** 2E-phytenal
 
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** 3,7,11,15-tetramethyl-2E-hexadecenal
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN66-479]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CPD-171]][c] '''+''' 1 [[CPD-5164]][c] '''=>''' 1 [[CPD-5165]][c] '''+''' 1 [[DOLICHOLP]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN66-478]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 a dolichyl β-D-mannosyl phosphate[c] '''+''' 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''=>''' 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→3)-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 a dolichyl phosphate[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_8232]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''19''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIPID_MAPS : LMPR0104010025
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29530 29530]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=9900764 9900764]
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* LIGAND-RXN:
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{{#set: smiles=CC(C)CCCC(C)CCCC(C)CCCC(C)=C[CH]=O}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06258 R06258]
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{{#set: common name=phytenal}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: inchi key=InChIKey=RAFZYSUICBQABU-PYDDKJGSSA-N}}
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{{#set: ec number=EC-2.4.1.258}}
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{{#set: molecular weight=294.52    }}
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{{#set: gene associated=Tiso_gene_8232}}
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{{#set: common name=2E-phytenal|3,7,11,15-tetramethyl-2E-hexadecenal}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: consumed by=RXN66-479}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: produced by=RXN66-478}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:32, 21 March 2018

Reaction RXN-5466

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a dolichyl β-D-mannosyl phosphate[c] + 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] => 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→3)-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 a dolichyl phosphate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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