Difference between revisions of "ORNITHINE-CYCLODEAMINASE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_6030 == * left end position: ** 2338 * transcription direction: ** POSITIVE * right end position: ** 4353 * centisome position: ** 15.63879...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-CYCLODEAMINASE-RXN ORNITHINE-CYCLODEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_6030 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-CYCLODEAMINASE-RXN ORNITHINE-CYCLODEAMINASE-RXN] ==
* left end position:
+
* direction:
** 2338
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** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
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** ornithine_cyclodeaminase
* right end position:
+
* ec number:
** 4353
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** [http://enzyme.expasy.org/EC/4.3.1.12 EC-4.3.1.12]
* centisome position:
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** 15.638796   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[3.1.3.56-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[L-ORNITHINE]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[AMMONIUM]][c]
***automated-name-match
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* With common name(s):
* [[RXN-8730]]
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** 1 L-ornithine[c] '''=>''' 1 L-proline[c] '''+''' 1 ammonium[c]
** in-silico_annotation
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***automated-name-match
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== Genes associated with this reaction  ==
== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
* [[PWY-6364]]
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* Gene: [[Tiso_gene_1843]]
* [[PWY-6362]]
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** Source: [[annotation-in-silico_annotation]]
* [[PWY-6363]]
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*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17134]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
 +
* [[ORN-AMINOPENTANOATE-CAT-PWY]], L-ornithine degradation I (L-proline biosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=ORN-AMINOPENTANOATE-CAT-PWY ORN-AMINOPENTANOATE-CAT-PWY]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[ARG-GLU-PWY]], L-arginine degradation VII (arginase 3 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-GLU-PWY ARG-GLU-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=2338}}
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* RHEA:
{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24368 24368]
{{#set: right end position=4353}}
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* LIGAND-RXN:
{{#set: centisome position=15.638796    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00671 R00671]
{{#set: reaction associated=3.1.3.56-RXN|RXN-8730}}
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* UNIPROT:
{{#set: pathway associated=PWY-6364|PWY-6362|PWY-6363}}
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** [http://www.uniprot.org/uniprot/Q59701 Q59701]
 +
** [http://www.uniprot.org/uniprot/P09773 P09773]
 +
** [http://www.uniprot.org/uniprot/P33728 P33728]
 +
** [http://www.uniprot.org/uniprot/O68052 O68052]
 +
** [http://www.uniprot.org/uniprot/Q9WWA2 Q9WWA2]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ornithine_cyclodeaminase}}
 +
{{#set: ec number=EC-4.3.1.12}}
 +
{{#set: gene associated=Tiso_gene_1843|Tiso_gene_17134}}
 +
{{#set: in pathway=ORN-AMINOPENTANOATE-CAT-PWY|ARG-GLU-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:32, 21 March 2018

Reaction ORNITHINE-CYCLODEAMINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ornithine_cyclodeaminase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-ornithine[c] => 1 L-proline[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links