Difference between revisions of "Tiso gene 2572"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] == * direction: ** REVERSIBLE * common name: ** glucose-methanol-choline_oxidoredu...")
 
(Created page with "Category:Gene == Gene Tiso_gene_2572 == * right end position: ** 10801 * transcription direction: ** POSITIVE * left end position: ** 7476 * centisome position: ** 39.4970...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] ==
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== Gene Tiso_gene_2572 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 10801
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* common name:
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* transcription direction:
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** glucose-methanol-choline_oxidoreductase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.1.99.1 EC-1.1.99.1]
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** 7476
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* centisome position:
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** 39.49704   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1-PHOSPHATIDYLINOSITOL-KINASE-RXN]]
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** 1 [[CHOLINE]][c] '''+''' 1 [[Acceptor]][c] '''<=>''' 1 [[Donor-H2]][c] '''+''' 1 [[BETAINE_ALDEHYDE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 choline[c] '''+''' 1 an oxidized electron acceptor[c] '''<=>''' 1 a reduced electron acceptor[c] '''+''' 1 betaine aldehyde[c]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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* [[PWY-6352]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-6351]]
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* [[Tiso_gene_16765]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria): [http://metacyc.org/META/NEW-IMAGE?object=BETSYN-PWY BETSYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=10801}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17433 17433]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=7476}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01025 R01025]
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{{#set: centisome position=39.49704    }}
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* UNIPROT:
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{{#set: reaction associated=1-PHOSPHATIDYLINOSITOL-KINASE-RXN}}
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** [http://www.uniprot.org/uniprot/P17444 P17444]
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{{#set: pathway associated=PWY-6352|PWY-6351}}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=glucose-methanol-choline_oxidoreductase}}
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{{#set: ec number=EC-1.1.99.1}}
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{{#set: gene associated=Tiso_gene_16765}}
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{{#set: in pathway=CHOLINE-BETAINE-ANA-PWY|BETSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:32, 21 March 2018

Gene Tiso_gene_2572

  • right end position:
    • 10801
  • transcription direction:
    • POSITIVE
  • left end position:
    • 7476
  • centisome position:
    • 39.49704
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2572&oldid=42235"