Difference between revisions of "SARCOSINE-DEHYDROGENASE-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TREDEGLOW-PWY TREDEGLOW-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SARCOSINE-DEHYDROGENASE-RXN SARCOSINE-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TREDEGLOW-PWY TREDEGLOW-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SARCOSINE-DEHYDROGENASE-RXN SARCOSINE-DEHYDROGENASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** trehalose degradation I (low osmolarity)
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** sarcosine_dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.5.8.3 EC-1.5.8.3]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
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* [[GLUCOKIN-RXN]]
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** 1 [[ETF-Oxidized]][c] '''+''' 1 [[SARCOSINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[FORMALDEHYDE]][c] '''+''' 1 [[GLY]][c] '''+''' 1 [[ETF-Reduced]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_3107]]
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** 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 sarcosine[c] '''+''' 1 H2O[c] '''+''' 1 H+[c] '''=>''' 1 formaldehyde[c] '''+''' 1 glycine[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
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*** [[Tiso_gene_1303]]
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** 4 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_14788]]
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*** [[orthology-synechocystis]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Reaction(s) not found ==
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=TRE6PHYDRO-RXN TRE6PHYDRO-RXN]
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* [[CRNFORCAT-PWY]], creatinine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CRNFORCAT-PWY CRNFORCAT-PWY]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-4722]], creatinine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4722 PWY-4722]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=TREDEGLOW-PWY TREDEGLOW-PWY]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19793 19793]
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{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
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{{#set: common name=trehalose degradation I (low osmolarity)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00611 R00611]
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{{#set: reaction found=1}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=2}}
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{{#set: common name=sarcosine_dehydrogenase}}
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{{#set: completion rate=50.0}}
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{{#set: ec number=EC-1.5.8.3}}
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{{#set: gene associated=Tiso_gene_14788}}
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{{#set: in pathway=CRNFORCAT-PWY|PWY-4722}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:32, 21 March 2018

Reaction SARCOSINE-DEHYDROGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • sarcosine_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an oxidized electron-transfer flavoprotein[c] + 1 sarcosine[c] + 1 H2O[c] + 1 H+[c] => 1 formaldehyde[c] + 1 glycine[c] + 1 a reduced electron-transfer flavoprotein[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CRNFORCAT-PWY, creatinine degradation I: CRNFORCAT-PWY
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-4722, creatinine degradation II: PWY-4722
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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