Difference between revisions of "PWY-I9"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.88-RXN 3.5.1.88-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** polypeptide_deformyla...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] * comm...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.88-RXN 3.5.1.88-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** polypeptide_deformylase
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** L-cysteine biosynthesis VI (from L-methionine)
* ec number:
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** [http://enzyme.expasy.org/EC/3.5.1.88 EC-3.5.1.88]
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* Synonym(s):
 
* Synonym(s):
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** reverse transsulfuration
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** methionine to cysteine transsulfuration
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''5''' reactions found over '''7''' reactions in the full pathway
** 1 [[WATER]][c] '''+''' 1 [[FORMYL-L-METHIONYL-PEPTIDE]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[METHIONYL-PEPTIDE]][c]
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* [[ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 H2O[c] '''+''' 1 a [protein] N-terminal-formyl-L-methionine[c] '''=>''' 1 formate[c] '''+''' 1 an N-terminal L-methionyl-[protein][c]
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*** [[Tiso_gene_14191]]
 
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** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[orthology-esiliculosus]]
Genes have been associated with this reaction based on different elements listed below.
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* [[CYSTATHIONINE-BETA-SYNTHASE-RXN]]
* [[Tiso_gene_14998]]
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** 2 associated gene(s):
** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_7852]]
***EC-NUMBER
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*** [[Tiso_gene_3732]]
== Pathways  ==
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** 3 reconstruction source(s) associated:
== Reconstruction information  ==
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*** [[annotation-in-silico_annotation]]
* [[annotation]]:
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*** [[orthology-creinhardtii]]
** [[pathwaytools]]:
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*** [[orthology-esiliculosus]]
*** [[in-silico_annotation]]
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* [[O-SUCCHOMOSERLYASE-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_3732]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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* [[RXN-7605]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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* [[SAM-PWY]]
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** 0 associated gene:
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYLHOMOCYSTEINASE-RXN RIBOSYLHOMOCYSTEINASE-RXN]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
** [http://www.genome.jp/dbget-bin/www_bget?R05635 R05635]
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{{#set: common name=L-cysteine biosynthesis VI (from L-methionine)}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=reverse transsulfuration|methionine to cysteine transsulfuration}}
{{#set: common name=polypeptide_deformylase}}
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{{#set: reaction found=5}}
{{#set: ec number=EC-3.5.1.88}}
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{{#set: total reaction=7}}
{{#set: gene associated=Tiso_gene_14998}}
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{{#set: completion rate=71.0}}
{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:33, 21 March 2018

Pathway PWY-I9

  • taxonomic range:
  • common name:
    • L-cysteine biosynthesis VI (from L-methionine)
  • Synonym(s):
    • reverse transsulfuration
    • methionine to cysteine transsulfuration

Reaction(s) found

5 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links