Difference between revisions of "PWY-I9"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-11...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] * comm...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3035 TAX-3035]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
+
 
* common name:
 
* common name:
−
** TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
+
** L-cysteine biosynthesis VI (from L-methionine)
 
* Synonym(s):
 
* Synonym(s):
−
** citric acid cycle
+
** reverse transsulfuration
−
** tricarboxylic acid cycle
+
** methionine to cysteine transsulfuration
−
** Szent-Gyorgyi-Krebs cycle
+
−
** Krebs cycle
+
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''9''' reactions found over '''12''' reactions in the full pathway
+
  '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[ACONITATEDEHYDR-RXN]]
+
* [[ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_13007]]
+
*** [[Tiso_gene_14191]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
 +
* [[CYSTATHIONINE-BETA-SYNTHASE-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_7852]]
 +
*** [[Tiso_gene_3732]]
 
** 3 reconstruction source(s) associated:
 
** 3 reconstruction source(s) associated:
−
*** [[annotation-experimental_annotation]]
 
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
*** [[orthology-synechocystis]]
+
*** [[orthology-creinhardtii]]
−
* [[ACONITATEHYDR-RXN]]
+
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_13007]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[annotation-experimental_annotation]]
+
−
* [[CITSYN-RXN]]
+
−
** 4 associated gene(s):
+
−
*** [[Tiso_gene_18030]]
+
−
*** [[Tiso_gene_9601]]
+
−
*** [[Tiso_gene_9603]]
+
−
*** [[Tiso_gene_9602]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[manual-primary_network]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
* [[FUMHYDR-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_6720]]
+
−
*** [[Tiso_gene_3691]]
+
−
** 6 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
*** [[annotation-in-silico_annotation]]
+
* [[O-SUCCHOMOSERLYASE-RXN]]
−
*** [[orthology-athaliana]]
+
−
*** [[manual-primary_network]]
+
−
*** [[orthology-creinhardtii]]
+
−
* [[ISOCIT-CLEAV-RXN]]
+
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_14008]]
+
*** [[Tiso_gene_3732]]
 
** 3 reconstruction source(s) associated:
 
** 3 reconstruction source(s) associated:
−
*** [[annotation-experimental_annotation]]
 
−
*** [[annotation-in-silico_annotation]]
 
−
*** [[orthology-esiliculosus]]
 
−
* [[ISOCITDEH-RXN]]
 
−
** 2 associated gene(s):
 
−
*** [[Tiso_gene_18262]]
 
−
*** [[Tiso_gene_10809]]
 
−
** 4 reconstruction source(s) associated:
 
−
*** [[annotation-in-silico_annotation]]
 
−
*** [[manual-primary_network]]
 
−
*** [[annotation-experimental_annotation]]
 
−
*** [[orthology-esiliculosus]]
 
−
* [[MALATE-DEH-RXN]]
 
−
** 2 associated gene(s):
 
−
*** [[Tiso_gene_1990]]
 
−
*** [[Tiso_gene_2323]]
 
−
** 7 reconstruction source(s) associated:
 
−
*** [[annotation-experimental_annotation]]
 
−
*** [[orthology-esiliculosus]]
 
−
*** [[annotation-in-silico_annotation]]
 
 
*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
−
*** [[orthology-synechocystis]]
 
−
*** [[manual-primary_network]]
 
 
*** [[orthology-creinhardtii]]
 
*** [[orthology-creinhardtii]]
−
* [[MALSYN-RXN]]
 
−
** 1 associated gene(s):
 
−
*** [[Tiso_gene_14377]]
 
−
** 3 reconstruction source(s) associated:
 
−
*** [[annotation-experimental_annotation]]
 
−
*** [[annotation-in-silico_annotation]]
 
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[SUCCCOASYN-RXN]]
+
* [[RXN-7605]]
−
** 2 associated gene(s):
+
** 0 associated gene:
−
*** [[Tiso_gene_15846]]
+
** 1 reconstruction source(s) associated:
−
*** [[Tiso_gene_11866]]
+
−
** 7 reconstruction source(s) associated:
+
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
−
*** [[orthology-esiliculosus]]
+
* [[SAM-PWY]]
−
*** [[annotation-in-silico_annotation]]
+
** 0 associated gene:
−
*** [[orthology-athaliana]]
+
−
*** [[orthology-synechocystis]]
+
−
*** [[manual-primary_network]]
+
−
*** [[orthology-creinhardtii]]
+
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYLHOMOCYSTEINASE-RXN RIBOSYLHOMOCYSTEINASE-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12912 RXN-12912]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-1117}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: taxonomic range=TAX-3035}}
+
{{#set: common name=L-cysteine biosynthesis VI (from L-methionine)}}
−
{{#set: taxonomic range=TAX-1224}}
+
{{#set: common name=reverse transsulfuration|methionine to cysteine transsulfuration}}
−
{{#set: taxonomic range=TAX-201174}}
+
{{#set: reaction found=5}}
−
{{#set: common name=TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)}}
+
{{#set: total reaction=7}}
−
{{#set: common name=citric acid cycle|tricarboxylic acid cycle|Szent-Gyorgyi-Krebs cycle|Krebs cycle}}
+
{{#set: completion rate=71.0}}
−
{{#set: reaction found=9}}
+
−
{{#set: total reaction=12}}
+
−
{{#set: completion rate=75.0}}
+

Latest revision as of 20:33, 21 March 2018

Pathway PWY-I9

  • taxonomic range:
  • common name:
    • L-cysteine biosynthesis VI (from L-methionine)
  • Synonym(s):
    • reverse transsulfuration
    • methionine to cysteine transsulfuration

Reaction(s) found

5 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-I9&oldid=42303"