Difference between revisions of "METHIONYL-TRNA-FORMYLTRANSFERASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-6991 CPD-6991] == * smiles: ** C3(C=CC(C2(OC1(=CC(=CC(=C1C(C2)=O)O)[O-])))=CC=3) * inchi ke...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHIONYL-TRNA-FORMYLTRANSFERASE-RXN METHIONYL-TRNA-FORMYLTRANSFERASE-RXN] == * direction: ** LEFT-...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-6991 CPD-6991] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHIONYL-TRNA-FORMYLTRANSFERASE-RXN METHIONYL-TRNA-FORMYLTRANSFERASE-RXN] ==
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* smiles:
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* direction:
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** C3(C=CC(C2(OC1(=CC(=CC(=C1C(C2)=O)O)[O-])))=CC=3)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=URFCJEUYXNAHFI-ZDUSSCGKSA-M
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* common name:
 
* common name:
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** (2S)-pinocembrin
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** methionyl-trna_formyltransferase
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* molecular weight:
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** ribosomal_rna_small_subunit_methyltransferase
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** 255.249   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.2.9 EC-2.1.2.9]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-7648]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[L-methionyl-tRNAfmet]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[THF-GLU-N]][c] '''+''' 1 [[N-formyl-L-methionyl-tRNAfmet]][c]
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* [[RXN-7647]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 an L-methionyl-[initiator tRNAmet][c] '''+''' 1 an N10-formyl-tetrahydrofolate[c] '''=>''' 1 H+[c] '''+''' 1 a tetrahydrofolate[c] '''+''' 1 an N-formyl-L-methionyl-[initiator tRNAmet][c]
 +
 
 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_13560]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_13561]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_9355]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIPID_MAPS : LMPK12140214
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R03940 R03940]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25200438 25200438]
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* UNIPROT:
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* HMDB : HMDB30808
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** [http://www.uniprot.org/uniprot/P94463 P94463]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9PJ28 Q9PJ28]
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** [http://www.genome.jp/dbget-bin/www_bget?C09827 C09827]
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** [http://www.uniprot.org/uniprot/P50932 P50932]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P47605 P47605]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=28157 28157]
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** [http://www.uniprot.org/uniprot/P44787 P44787]
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* METABOLIGHTS : MTBLC28157
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** [http://www.uniprot.org/uniprot/P56461 P56461]
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{{#set: smiles=C3(C=CC(C2(OC1(=CC(=CC(=C1C(C2)=O)O)[O-])))=CC=3)}}
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** [http://www.uniprot.org/uniprot/Q9CEE9 Q9CEE9]
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{{#set: inchi key=InChIKey=URFCJEUYXNAHFI-ZDUSSCGKSA-M}}
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** [http://www.uniprot.org/uniprot/O51091 O51091]
−
{{#set: common name=(2S)-pinocembrin}}
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** [http://www.uniprot.org/uniprot/Q9JWY9 Q9JWY9]
−
{{#set: molecular weight=255.249    }}
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** [http://www.uniprot.org/uniprot/P23882 P23882]
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{{#set: consumed by=RXN-7648}}
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** [http://www.uniprot.org/uniprot/P32785 P32785]
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{{#set: produced by=RXN-7647}}
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** [http://www.uniprot.org/uniprot/P75235 P75235]
 +
** [http://www.uniprot.org/uniprot/Q55163 Q55163]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=methionyl-trna_formyltransferase}}
 +
{{#set: common name=ribosomal_rna_small_subunit_methyltransferase}}
 +
{{#set: ec number=EC-2.1.2.9}}
 +
{{#set: gene associated=Tiso_gene_13560|Tiso_gene_13561|Tiso_gene_9355}}
 +
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:33, 21 March 2018

Reaction METHIONYL-TRNA-FORMYLTRANSFERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • methionyl-trna_formyltransferase
    • ribosomal_rna_small_subunit_methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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