Difference between revisions of "RXN-14775"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14775 RXN-14775] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase * e...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14775 RXN-14775] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** methylerythritol phosphate pathway I
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** acyl-coenzyme_a_oxidase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* Synonym(s):
 
* Synonym(s):
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** nonmevalonate isopentenyl diphosphate biosynthesis
 
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** methylerythritol phosphate degradation
 
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** MEP degradation
 
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** deoxyxylulose phosphate pathway
 
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** DOXP pathway
 
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** Rohmer pathway
 
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** isopentenyl diphosphate biosynthesis -- mevalonate-independent
 
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** nonmevalonate isoprenoid pathway
 
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** MEP pathway
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''9''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[2.7.1.148-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-15668]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-15654]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_13463]]
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** 1 oxygen[c] '''+''' 1 4-cis-undecenoyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 2-trans, 4-cis-undecadienoyl-CoA[c]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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== Genes associated with this reaction  ==
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*** [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_18566]]
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*** [[orthology-athaliana]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** Assignment: EC-NUMBER
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*** [[manual-primary_network]]
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** Source: [[orthology-esiliculosus]]
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*** [[orthology-creinhardtii]]
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== Pathways  ==
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* [[2.7.7.60-RXN]]
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* [[PWY-7337]], 10-cis-heptadecenoyl-CoA degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7337 PWY-7337]
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** 1 associated gene(s):
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** '''3''' reactions found over '''12''' reactions in the full pathway
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*** [[Tiso_gene_17568]]
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== Reconstruction information  ==
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** 6 reconstruction source(s) associated:
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* Category: [[orthology]]
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*** [[annotation-experimental_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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*** [[annotation-in-silico_annotation]]
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* Category: [[annotation]]
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*** [[orthology-synechocystis]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** Tool: [[pathwaytools]]
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*** [[orthology-creinhardtii]]
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* [[DXPREDISOM-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_15169]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[DXS-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_17311]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[IPPISOM-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_8653]]
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** 2 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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* [[ISPH2-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_5609]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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* [[RXN-15878]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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* [[RXN0-302]]
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** 1 associated gene(s):
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*** [[Tiso_gene_9642]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[RXN0-884]]
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** 1 associated gene(s):
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*** [[Tiso_gene_5609]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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* ECOCYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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{{#set: common name=acyl-coenzyme_a_oxidase}}
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* ARACYC:
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{{#set: ec number=EC-1.3.3.6}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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{{#set: gene associated=Tiso_gene_18566}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: in pathway=PWY-7337}}
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{{#set: common name=methylerythritol phosphate pathway I}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: common name=nonmevalonate isopentenyl diphosphate biosynthesis|methylerythritol phosphate degradation|MEP degradation|deoxyxylulose phosphate pathway|DOXP pathway|Rohmer pathway|isopentenyl diphosphate biosynthesis -- mevalonate-independent|nonmevalonate isoprenoid pathway|MEP pathway}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reaction found=9}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: total reaction=9}}
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{{#set: completion rate=100.0}}
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Latest revision as of 19:33, 21 March 2018

Reaction RXN-14775

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-coenzyme_a_oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7337, 10-cis-heptadecenoyl-CoA degradation (yeast): PWY-7337
    • 3 reactions found over 12 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-14775&oldid=42354"