Difference between revisions of "PWY-7187"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.4.9-RXN 6.3.4.9-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.4.9-RXN 6.3.4.9-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://enzyme.expasy.org/EC/6.3.4.9 EC-6.3.4.9]
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* common name:
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** pyrimidine deoxyribonucleotides de novo biosynthesis II
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''7''' reactions in the full pathway
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** 1 [[apo-Transcarboxylases]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[BIOTIN]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[holo-Transcarboxylases]][c] '''+''' 1 [[PPI]][c]
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* [[DTDPKIN-RXN]]
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* With common name(s):
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** 6 associated gene(s):
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** 1 an apo-[methylmalonyl-CoA:pyruvate carboxytransferase][c] '''+''' 1 ATP[c] '''+''' 1 biotin[c] '''=>''' 1 AMP[c] '''+''' 1 a holo-[methylmalonyl-CoA:pyruvate carboxytransferase][c] '''+''' 1 diphosphate[c]
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*** [[Tiso_gene_18224]]
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*** [[Tiso_gene_16529]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_195]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_17271]]
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* [[Tiso_gene_8713]]
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*** [[Tiso_gene_17272]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_9290]]
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* [[Tiso_gene_17216]]
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** 6 reconstruction source(s) associated:
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** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-experimental_annotation]]
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== Pathways  ==
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*** [[orthology-esiliculosus]]
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== Reconstruction information  ==
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*** [[annotation-in-silico_annotation]]
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* [[orthology]]:
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*** [[orthology-athaliana]]
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** [[pantograph]]:
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*** [[orthology-synechocystis]]
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*** [[esiliculosus]]
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*** [[manual-primary_network]]
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* [[DTMPKI-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_3755]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-experimental_annotation]]
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* [[DUTP-PYROP-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_18793]]
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*** [[Tiso_gene_18792]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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* [[THYMIDYLATESYN-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_7708]]
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*** [[Tiso_gene_18478]]
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** 2 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=DCTP-DEAM-RXN DCTP-DEAM-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-723 RXN0-723]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-724 RXN0-724]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* ECOCYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R04563 R04563]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-7187 PWY-7187]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: ec number=EC-6.3.4.9}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: gene associated=Tiso_gene_8713|Tiso_gene_17216}}
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{{#set: common name=pyrimidine deoxyribonucleotides de novo biosynthesis II}}
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{{#set: in pathway=}}
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{{#set: reaction found=4}}
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{{#set: reconstruction category=orthology}}
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{{#set: total reaction=7}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: completion rate=57.0}}
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{{#set: reconstruction source=esiliculosus}}
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Latest revision as of 19:34, 21 March 2018

Pathway PWY-7187

  • taxonomic range:
  • common name:
    • pyrimidine deoxyribonucleotides de novo biosynthesis II
  • Synonym(s):

Reaction(s) found

4 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7187&oldid=42430"