Difference between revisions of "RIBULOSE-5P"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALONYL-COA-DECARBOXYLASE-RXN MALONYL-COA-DECARBOXYLASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=RIBULOSE-5P RIBULOSE-5P] == * smiles: ** C(C(C(C(CO)=O)O)O)OP([O-])([O-])=O * common name: ** D...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALONYL-COA-DECARBOXYLASE-RXN MALONYL-COA-DECARBOXYLASE-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=RIBULOSE-5P RIBULOSE-5P] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** C(C(C(C(CO)=O)O)O)OP([O-])([O-])=O
 
* common name:
 
* common name:
−
** lipoxygenase
+
** D-ribulose 5-phosphate
−
* ec number:
+
* inchi key:
−
** [http://enzyme.expasy.org/EC/4.1.1.9 EC-4.1.1.9]
+
** InChIKey=FNZLKVNUWIIPSJ-UHNVWZDZSA-L
 +
* molecular weight:
 +
** 228.095   
 
* Synonym(s):
 
* Synonym(s):
 +
** ribulose-5P
 +
** D-ribulose-5-P
 +
** ribulose-5-P
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[DIOHBUTANONEPSYN-RXN]]
−
** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-COA]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
== Reaction(s) known to produce the compound ==
−
* With common name(s):
+
* [[RXN-9952]]
−
** 1 H+[c] '''+''' 1 malonyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 CO2[c]
+
* [[6PGLUCONDEHYDROG-RXN]]
−
 
+
== Reaction(s) of unknown directionality ==
−
== Genes associated with this reaction  ==
+
* [[D-RIBULOKIN-RXN]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[RIBULP3EPIM-RXN]]
−
* [[Tiso_gene_4463]]
+
* [[PHOSPHORIBULOKINASE-RXN]]
−
** IN-SILICO_ANNOTATION
+
* [[RIB5PISOM-RXN]]
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[creinhardtii]]
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* CAS : 4151-19-3
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18781 18781]
+
* BIGG : ru5p__D
−
* LIGAND-RXN:
+
* PUBCHEM:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00233 R00233]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=21144996 21144996]
−
* UNIPROT:
+
* HMDB : HMDB00618
−
** [http://www.uniprot.org/uniprot/P12617 P12617]
+
* LIGAND-CPD:
−
** [http://www.uniprot.org/uniprot/Q54112 Q54112]
+
** [http://www.genome.jp/dbget-bin/www_bget?C00199 C00199]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* CHEMSPIDER:
−
{{#set: common name=lipoxygenase}}
+
** [http://www.chemspider.com/Chemical-Structure.20015724.html 20015724]
−
{{#set: ec number=EC-4.1.1.9}}
+
* CHEBI:
−
{{#set: gene associated=Tiso_gene_4463}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58121 58121]
−
{{#set: in pathway=}}
+
* METABOLIGHTS : MTBLC58121
−
{{#set: reconstruction category=orthology}}
+
{{#set: smiles=C(C(C(C(CO)=O)O)O)OP([O-])([O-])=O}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: common name=D-ribulose 5-phosphate}}
−
{{#set: reconstruction source=creinhardtii|esiliculosus}}
+
{{#set: inchi key=InChIKey=FNZLKVNUWIIPSJ-UHNVWZDZSA-L}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: molecular weight=228.095    }}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: common name=ribulose-5P|D-ribulose-5-P|ribulose-5-P}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: consumed by=DIOHBUTANONEPSYN-RXN}}
 +
{{#set: produced by=RXN-9952|6PGLUCONDEHYDROG-RXN}}
 +
{{#set: reversible reaction associated=D-RIBULOKIN-RXN|RIBULP3EPIM-RXN|PHOSPHORIBULOKINASE-RXN|RIB5PISOM-RXN}}

Latest revision as of 20:34, 21 March 2018

Metabolite RIBULOSE-5P

  • smiles:
    • C(C(C(C(CO)=O)O)O)OP([O-])([O-])=O
  • common name:
    • D-ribulose 5-phosphate
  • inchi key:
    • InChIKey=FNZLKVNUWIIPSJ-UHNVWZDZSA-L
  • molecular weight:
    • 228.095
  • Synonym(s):
    • ribulose-5P
    • D-ribulose-5-P
    • ribulose-5-P

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 4151-19-3
  • BIGG : ru5p__D
  • PUBCHEM:
  • HMDB : HMDB00618
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC58121
"C(C(C(C(CO)=O)O)O)OP([O-])([O-])=O" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RIBULOSE-5P&oldid=42458"