Difference between revisions of "ASPARAGINE-DEG1-PWY-1"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8675 RXN-8675] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** uroporphyrinogen methyltransfe...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY-1 ASPARAGINE-DEG1-PWY-1] == * taxonomic range: ** [http://metacyc.org/META/NEW-IM...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8675 RXN-8675] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY-1 ASPARAGINE-DEG1-PWY-1] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
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* common name:
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** L-asparagine degradation III (mammalian)
 
* Synonym(s):
 
* Synonym(s):
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** uroporphyrinogen methyltransferase
 
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** uroporphyrinogen-III methyltransferase
 
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** adenosylmethionine-uroporphyrinogen III methyltransferase
 
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** S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase
 
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** SirA
 
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** CysG
 
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** uroporphyrin-III C-methyltransferase (incorrect)
 
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** S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase (incorrect)
 
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''3''' reactions in the full pathway
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CPD-9038]][c] '''=>''' 1 [[DIHYDROSIROHYDROCHLORIN]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
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* [[ASPAMINOTRANS-RXN]]
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* With common name(s):
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** 6 associated gene(s):
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 precorrin-1[c] '''=>''' 1 precorrin-2[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
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*** [[Tiso_gene_17718]]
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*** [[Tiso_gene_6815]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_13538]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_15680]]
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* [[Tiso_gene_8614]]
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*** [[Tiso_gene_17809]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_12889]]
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== Pathways  ==
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** 7 reconstruction source(s) associated:
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* [[PWY-7376]], cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7376 PWY-7376]
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*** [[annotation-experimental_annotation]]
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** '''2''' reactions found over '''13''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7377 PWY-7377]
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*** [[annotation-in-silico_annotation]]
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** '''3''' reactions found over '''15''' reactions in the full pathway
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*** [[orthology-athaliana]]
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* [[PWY-5194]], siroheme biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5194 PWY-5194]
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*** [[orthology-synechocystis]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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*** [[manual-primary_network]]
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* [[PWY-5196]], factor 430 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5196 PWY-5196]
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*** [[orthology-creinhardtii]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[ASPARAGHYD-RXN]]
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== Reconstruction information  ==
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** 3 associated gene(s):
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* Category: [[orthology]]
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*** [[Tiso_gene_19398]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_17477]]
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*** Tool: [[pantograph]]
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*** [[Tiso_gene_3570]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.26-RXN 3.5.1.26-RXN]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-40674}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21972 21972]
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{{#set: common name=L-asparagine degradation III (mammalian)}}
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* LIGAND-RXN:
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{{#set: reaction found=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07238 R07238]
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{{#set: total reaction=3}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=67.0}}
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{{#set: common name=uroporphyrinogen methyltransferase|uroporphyrinogen-III methyltransferase|adenosylmethionine-uroporphyrinogen III methyltransferase|S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase|SirA|CysG|uroporphyrin-III C-methyltransferase (incorrect)|S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase (incorrect)}}
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{{#set: gene associated=Tiso_gene_8614}}
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{{#set: in pathway=PWY-7376|PWY-7377|PWY-5194|PWY-5196}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:34, 21 March 2018

Pathway ASPARAGINE-DEG1-PWY-1

  • taxonomic range:
  • common name:
    • L-asparagine degradation III (mammalian)
  • Synonym(s):

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ASPARAGINE-DEG1-PWY-1&oldid=42479"