Difference between revisions of "AGPT"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6692 PWY-6692] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AGPT AGPT] == * direction: ** LEFT-TO-RIGHT * common name: ** ATP:GMP phosphotransferase * Synonym(...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6692 PWY-6692] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AGPT AGPT] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Fe(II) oxidation
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** ATP:GMP phosphotransferase
 
* Synonym(s):
 
* Synonym(s):
** iron oxidation
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''3''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
* [[NADH-DEHYDROG-A-RXN]]
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** 1.0 [[GMP]][c] '''+''' 1.0 [[ATP]][c] '''=>''' 1.0 [[GDP]][c] '''+''' 1.0 [[ADP]][c]
** 18 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_10326]]
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** 1.0 GMP[c] '''+''' 1.0 ATP[c] '''=>''' 1.0 GDP[c] '''+''' 1.0 ADP[c]
*** [[Tiso_gene_18831]]
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*** [[Tiso_gene_4894]]
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== Genes associated with this reaction  ==
*** [[Tiso_gene_9874]]
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Genes have been associated with this reaction based on different elements listed below.
*** [[Tiso_gene_18172]]
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* Gene: [[Tiso_gene_6298]]
*** [[Tiso_gene_18339]]
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** Source: [[orthology-creinhardtii]]
*** [[Tiso_gene_19691]]
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* Gene: [[Tiso_gene_15049]]
*** [[Tiso_gene_2949]]
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** Source: [[orthology-creinhardtii]]
*** [[Tiso_gene_4836]]
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== Pathways  ==
*** [[Tiso_gene_17199]]
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== Reconstruction information  ==
*** [[Tiso_gene_5171]]
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* Category: [[orthology]]
*** [[Tiso_gene_18707]]
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** Source: [[orthology-creinhardtii]]
*** [[Tiso_gene_359]]
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*** Tool: [[pantograph]]
*** [[Tiso_gene_3113]]
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*** [[Tiso_gene_13075]]
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*** [[Tiso_gene_355]]
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*** [[Tiso_gene_358]]
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*** [[Tiso_gene_15276]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-15829]]
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** 5 associated gene(s):
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*** [[Tiso_gene_7235]]
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*** [[Tiso_gene_9627]]
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*** [[Tiso_gene_15926]]
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*** [[Tiso_gene_4973]]
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*** [[Tiso_gene_18330]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-15830]]
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** 4 associated gene(s):
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*** [[Tiso_gene_15682]]
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*** [[Tiso_gene_18053]]
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*** [[Tiso_gene_18580]]
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*** [[Tiso_gene_7948]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12075 RXN-12075]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12076 RXN-12076]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15832 RXN-15832]
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== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Fe(II) oxidation}}
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{{#set: common name=ATP:GMP phosphotransferase}}
{{#set: common name=iron oxidation}}
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{{#set: gene associated=Tiso_gene_6298|Tiso_gene_15049}}
{{#set: reaction found=3}}
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{{#set: in pathway=}}
{{#set: total reaction=6}}
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{{#set: reconstruction category=orthology}}
{{#set: completion rate=50.0}}
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{{#set: reconstruction source=orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:34, 21 March 2018

Reaction AGPT

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ATP:GMP phosphotransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 GMP[c] + 1.0 ATP[c] => 1.0 GDP[c] + 1.0 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links