Difference between revisions of "Tiso gene 10646"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEROXID-RXN PEROXID-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ascorbate_peroxidase **...")
 
(Created page with "Category:Gene == Gene Tiso_gene_10646 == * right end position: ** 7641 * transcription direction: ** POSITIVE * left end position: ** 5934 * centisome position: ** 70.7439...")
 
(4 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEROXID-RXN PEROXID-RXN] ==
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== Gene Tiso_gene_10646 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 7641
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* common name:
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* transcription direction:
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** ascorbate_peroxidase
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** POSITIVE
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** ORF
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* left end position:
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* ec number:
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** 5934
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** [http://enzyme.expasy.org/EC/1.11.1.7 EC-1.11.1.7]
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* centisome position:
 +
** 70.74392   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.2.1.13-RXN]]
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** 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[Phenolic-Donors]][c] '''=>''' 2 [[Phenoxyl-rad-of-phenolic-donors]][c] '''+''' 2 [[WATER]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 hydrogen peroxide[c] '''+''' 2 a phenolic donor[c] '''=>''' 2 a phenoxyl radical of a phenolic donor[c] '''+''' 2 H2O[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[GAPDHSYNEC-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-experimental_annotation]]
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* [[Tiso_gene_20206]]
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*** Assignment: automated-name-match
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[GAPOXNPHOSPHN-RXN]]
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* [[Tiso_gene_6431]]
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** Source: [[orthology-athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[orthology-athaliana]]
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* [[Tiso_gene_7067]]
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** Source: [[orthology-synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[orthology-esiliculosus]]
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* [[Tiso_gene_15962]]
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** Source: [[orthology-creinhardtii]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
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***EC-NUMBER
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* Reaction: [[TRIOSEPISOMERIZATION-RXN]]
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* [[Tiso_gene_5857]]
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** Source: [[orthology-esiliculosus]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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* [[Tiso_gene_15820]]
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* [[PWY-1042]]
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** IN-SILICO_ANNOTATION
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* [[P341-PWY]]
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***EC-NUMBER
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* [[PWY66-399]]
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* [[Tiso_gene_9359]]
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* [[PWY66-373]]
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** [[pantograph]]-[[esiliculosus]]
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* [[GLUCONEO-PWY]]
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* [[Tiso_gene_19683]]
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* [[GLYCOLYSIS]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-6901]]
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* [[Tiso_gene_11016]]
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* [[SUCSYN-PWY]]
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** IN-SILICO_ANNOTATION
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* [[P124-PWY]]
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***EC-NUMBER
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* [[PWY-6142]]
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* [[Tiso_gene_17551]]
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* [[CALVIN-PWY]]
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** [[pantograph]]-[[esiliculosus]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[Tiso_gene_16028]]
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* [[PWY-5484]]
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** [[pantograph]]-[[esiliculosus]]
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* [[P185-PWY]]
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== Pathways  ==
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* [[P122-PWY]]
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== Reconstruction information  ==
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* [[PWY-7003]]
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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−
* [[annotation]]:
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−
** [[pathwaytools]]:
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−
*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: right end position=7641}}
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** [http://www.uniprot.org/uniprot/P11678 P11678]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/P80025 P80025]
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{{#set: left end position=5934}}
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** [http://www.uniprot.org/uniprot/P22195 P22195]
+
{{#set: centisome position=70.74392    }}
−
** [http://www.uniprot.org/uniprot/P11965 P11965]
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{{#set: reaction associated=1.2.1.13-RXN|GAPDHSYNEC-RXN|GAPOXNPHOSPHN-RXN|TRIOSEPISOMERIZATION-RXN}}
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** [http://www.uniprot.org/uniprot/P05164 P05164]
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY66-399|PWY66-373|GLUCONEO-PWY|GLYCOLYSIS|PWY-6901|SUCSYN-PWY|P124-PWY|PWY-6142|CALVIN-PWY|ANAGLYCOLYSIS-PWY|PWY-5484|P185-PWY|P122-PWY|PWY-7003}}
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** [http://www.uniprot.org/uniprot/P22196 P22196]
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−
** [http://www.uniprot.org/uniprot/P13029 P13029]
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−
** [http://www.uniprot.org/uniprot/Q42853 Q42853]
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−
** [http://www.uniprot.org/uniprot/Q26059 Q26059]
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−
** [http://www.uniprot.org/uniprot/O24081 O24081]
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−
** [http://www.uniprot.org/uniprot/Q43790 Q43790]
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−
** [http://www.uniprot.org/uniprot/Q43791 Q43791]
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−
** [http://www.uniprot.org/uniprot/O24080 O24080]
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−
** [http://www.uniprot.org/uniprot/P22079 P22079]
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−
** [http://www.uniprot.org/uniprot/P17179 P17179]
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−
** [http://www.uniprot.org/uniprot/P17180 P17180]
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−
** [http://www.uniprot.org/uniprot/Q24926 Q24926]
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−
** [http://www.uniprot.org/uniprot/Q43854 Q43854]
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−
** [http://www.uniprot.org/uniprot/P14412 P14412]
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−
** [http://www.uniprot.org/uniprot/P24101 P24101]
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−
** [http://www.uniprot.org/uniprot/P24102 P24102]
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** [http://www.uniprot.org/uniprot/P00434 P00434]
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** [http://www.uniprot.org/uniprot/P00433 P00433]
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** [http://www.uniprot.org/uniprot/Q9S913 Q9S913]
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** [http://www.uniprot.org/uniprot/Q9S912 Q9S912]
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** [http://www.uniprot.org/uniprot/Q9S911 Q9S911]
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** [http://www.uniprot.org/uniprot/P15232 P15232]
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−
** [http://www.uniprot.org/uniprot/P15233 P15233]
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−
** [http://www.uniprot.org/uniprot/P15003 P15003]
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−
** [http://www.uniprot.org/uniprot/P15004 P15004]
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−
** [http://www.uniprot.org/uniprot/P15984 P15984]
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−
** [http://www.uniprot.org/uniprot/P11247 P11247]
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−
** [http://www.uniprot.org/uniprot/P12437 P12437]
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** [http://www.uniprot.org/uniprot/P06181 P06181]
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** [http://www.uniprot.org/uniprot/P19135 P19135]
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** [http://www.uniprot.org/uniprot/Q05855 Q05855]
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** [http://www.uniprot.org/uniprot/Q43212 Q43212]
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** [http://www.uniprot.org/uniprot/Q42517 Q42517]
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** [http://www.uniprot.org/uniprot/Q7M1X2 Q7M1X2]
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** [http://www.uniprot.org/uniprot/Q01548 Q01548]
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** [http://www.uniprot.org/uniprot/Q43006 Q43006]
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** [http://www.uniprot.org/uniprot/Q40069 Q40069]
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** [http://www.uniprot.org/uniprot/Q16771 Q16771]
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** [http://www.uniprot.org/uniprot/P16147 P16147]
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** [http://www.uniprot.org/uniprot/Q01603 Q01603]
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−
** [http://www.uniprot.org/uniprot/Q12575 Q12575]
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** [http://www.uniprot.org/uniprot/Q43774 Q43774]
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** [http://www.uniprot.org/uniprot/Q42854 Q42854]
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−
** [http://www.uniprot.org/uniprot/Q9SMU8 Q9SMU8]
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−
** [http://www.uniprot.org/uniprot/Q43158 Q43158]
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−
** [http://www.uniprot.org/uniprot/Q07446 Q07446]
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−
** [http://www.uniprot.org/uniprot/Q43032 Q43032]
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−
** [http://www.uniprot.org/uniprot/Q41577 Q41577]
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−
** [http://www.uniprot.org/uniprot/Q43218 Q43218]
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** [http://www.uniprot.org/uniprot/Q43219 Q43219]
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** [http://www.uniprot.org/uniprot/Q43220 Q43220]
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−
** [http://www.uniprot.org/uniprot/Q55110 Q55110]
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** [http://www.uniprot.org/uniprot/Q96518 Q96518]
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** [http://www.uniprot.org/uniprot/O22510 O22510]
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** [http://www.uniprot.org/uniprot/O80912 O80912]
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** [http://www.uniprot.org/uniprot/Q40486 Q40486]
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** [http://www.uniprot.org/uniprot/Q40487 Q40487]
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** [http://www.uniprot.org/uniprot/Q40555 Q40555]
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** [http://www.uniprot.org/uniprot/Q42964 Q42964]
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** [http://www.uniprot.org/uniprot/Q43004 Q43004]
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−
** [http://www.uniprot.org/uniprot/P37834 P37834]
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** [http://www.uniprot.org/uniprot/P37835 P37835]
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** [http://www.uniprot.org/uniprot/P93675 P93675]
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** [http://www.uniprot.org/uniprot/O24523 O24523]
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** [http://www.uniprot.org/uniprot/O49866 O49866]
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** [http://www.uniprot.org/uniprot/Q43731 Q43731]
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** [http://www.uniprot.org/uniprot/Q9SZE7 Q9SZE7]
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** [http://www.uniprot.org/uniprot/O22443 O22443]
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** [http://www.uniprot.org/uniprot/Q9SZB9 Q9SZB9]
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** [http://www.uniprot.org/uniprot/P27337 P27337]
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** [http://www.uniprot.org/uniprot/Q40068 Q40068]
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** [http://www.uniprot.org/uniprot/O64970 O64970]
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** [http://www.uniprot.org/uniprot/Q42784 Q42784]
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** [http://www.uniprot.org/uniprot/Q43499 Q43499]
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** [http://www.uniprot.org/uniprot/Q07445 Q07445]
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** [http://www.uniprot.org/uniprot/O22602 O22602]
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** [http://www.uniprot.org/uniprot/O65029 O65029]
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** [http://www.uniprot.org/uniprot/P93545 P93545]
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** [http://www.uniprot.org/uniprot/P93546 P93546]
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** [http://www.uniprot.org/uniprot/P93547 P93547]
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** [http://www.uniprot.org/uniprot/P93548 P93548]
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** [http://www.uniprot.org/uniprot/P93549 P93549]
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** [http://www.uniprot.org/uniprot/P93550 P93550]
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** [http://www.uniprot.org/uniprot/P93551 P93551]
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** [http://www.uniprot.org/uniprot/P93552 P93552]
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** [http://www.uniprot.org/uniprot/P93553 P93553]
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** [http://www.uniprot.org/uniprot/O49940 O49940]
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** [http://www.uniprot.org/uniprot/O49941 O49941]
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** [http://www.uniprot.org/uniprot/O49943 O49943]
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** [http://www.uniprot.org/uniprot/O49942 O49942]
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** [http://www.uniprot.org/uniprot/Q40949 Q40949]
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** [http://www.uniprot.org/uniprot/Q40950 Q40950]
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** [http://www.uniprot.org/uniprot/Q40366 Q40366]
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** [http://www.uniprot.org/uniprot/Q40367 Q40367]
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** [http://www.uniprot.org/uniprot/O24336 O24336]
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−
** [http://www.uniprot.org/uniprot/Q39652 Q39652]
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** [http://www.uniprot.org/uniprot/Q39653 Q39653]
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** [http://www.uniprot.org/uniprot/Q08671 Q08671]
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** [http://www.uniprot.org/uniprot/Q9SUT2 Q9SUT2]
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** [http://www.uniprot.org/uniprot/Q96522 Q96522]
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−
** [http://www.uniprot.org/uniprot/O81266 O81266]
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−
** [http://www.uniprot.org/uniprot/Q20616 Q20616]
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** [http://www.uniprot.org/uniprot/Q23490 Q23490]
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** [http://www.uniprot.org/uniprot/O59651 O59651]
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** [http://www.uniprot.org/uniprot/O31066 O31066]
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−
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ascorbate_peroxidase}}
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−
{{#set: common name=ORF}}
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−
{{#set: ec number=EC-1.11.1.7}}
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−
{{#set: gene associated=Tiso_gene_20206|Tiso_gene_6431|Tiso_gene_7067|Tiso_gene_15962|Tiso_gene_5857|Tiso_gene_15820|Tiso_gene_9359|Tiso_gene_19683|Tiso_gene_11016|Tiso_gene_17551|Tiso_gene_16028}}
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−
{{#set: in pathway=}}
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−
{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=esiliculosus}}
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−
{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:35, 21 March 2018

Gene Tiso_gene_10646

  • right end position:
    • 7641
  • transcription direction:
    • POSITIVE
  • left end position:
    • 5934
  • centisome position:
    • 70.74392
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10646&oldid=42524"