Difference between revisions of "3.1.3.67-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIOHBUTANONEPSYN-RXN DIOHBUTANONEPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribof...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.67-RXN 3.1.3.67-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIOHBUTANONEPSYN-RXN DIOHBUTANONEPSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.67-RXN 3.1.3.67-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** riboflavin_biosynthesis_protein
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.99.12 EC-4.1.99.12]
+
** [http://enzyme.expasy.org/EC/3.1.3.67 EC-3.1.3.67]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[RIBULOSE-5P]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[DIHYDROXY-BUTANONE-P]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[PHOSPHATIDYLINOSITOL-345-TRIPHOSPHATE]][c] '''=>''' 1 [[PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-ribulose 5-phosphate[c] '''=>''' 1 formate[c] '''+''' 1 1-deoxy-L-glycero-tetrulose 4-phosphate[c] '''+''' 1 H+[c]
+
** 1 H2O[c] '''+''' 1 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate[c] '''=>''' 1 a 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_14275]]
+
* Gene: [[Tiso_gene_19083]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-athaliana]]
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_19932]]
+
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
+
* [[PWY-6368]], 3-phosphoinositide degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6368 PWY-6368]
−
** '''4''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
+
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18457 18457]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25017 25017]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07281 R07281]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04513 R04513]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=riboflavin_biosynthesis_protein}}
+
{{#set: ec number=EC-3.1.3.67}}
−
{{#set: ec number=EC-4.1.99.12}}
+
{{#set: gene associated=Tiso_gene_19083}}
−
{{#set: gene associated=Tiso_gene_14275|Tiso_gene_19932}}
+
{{#set: in pathway=PWY-6368}}
−
{{#set: in pathway=PWY-6167|PWY-6168|RIBOSYN2-PWY}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:35, 21 March 2018

Reaction 3.1.3.67-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6368, 3-phosphoinositide degradation: PWY-6368
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links




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