Difference between revisions of "GAPDHSYNEC-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9674 RXN-9674] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-glucosidase-like_chlorop...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GAPDHSYNEC-RXN GAPDHSYNEC-RXN] == * direction: ** REVERSIBLE * common name: ** glyceraldehyde-3-pho...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9674 RXN-9674] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GAPDHSYNEC-RXN GAPDHSYNEC-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** beta-glucosidase-like_chloroplastic
+
** glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating)
−
** low_quality_protein:_beta-glucosidase-like_chloroplastic-like
+
−
** ORF
+
−
** beta_glucosidase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
+
** [http://enzyme.expasy.org/EC/1.2.1.59 EC-1.2.1.59]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-10277]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[CPD-12699]][c]
+
** 1 [[GAP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''<=>''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[DPG]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 lotaustralin[c] '''+''' 1 H2O[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 (2R)-2-hydroxy-2-methylbutanenitrile[c]
+
** 1 D-glyceraldehyde 3-phosphate[c] '''+''' 1 phosphate[c] '''+''' 1 NAD(P)+[c] '''<=>''' 1 NAD(P)H[c] '''+''' 1 1,3-bisphospho-D-glycerate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3467]]
+
* Gene: [[Tiso_gene_6765]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** EXPERIMENTAL_ANNOTATION
+
* Gene: [[Tiso_gene_20000]]
−
***EC-NUMBER
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_6188]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_10646]]
−
***EC-NUMBER
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_6187]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6497]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_2843]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_13305]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_8669]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6007]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10001]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_2344]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_5836]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_15067]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_13306]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_15066]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7092]], neolinustatin bioactivation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7092 PWY-7092]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6002]], lotaustralin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6002 PWY-6002]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-experimental_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=beta-glucosidase-like_chloroplastic}}
+
{{#set: common name=glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating)}}
−
{{#set: common name=low_quality_protein:_beta-glucosidase-like_chloroplastic-like}}
+
{{#set: ec number=EC-1.2.1.59}}
−
{{#set: common name=ORF}}
+
{{#set: gene associated=Tiso_gene_6765|Tiso_gene_20000|Tiso_gene_10646}}
−
{{#set: common name=beta_glucosidase}}
+
{{#set: in pathway=}}
−
{{#set: ec number=EC-3.2.1.21}}
+
−
{{#set: gene associated=Tiso_gene_3467|Tiso_gene_6188|Tiso_gene_6187|Tiso_gene_6497|Tiso_gene_2843|Tiso_gene_13305|Tiso_gene_8669|Tiso_gene_6007|Tiso_gene_10001|Tiso_gene_2344|Tiso_gene_5836|Tiso_gene_15067|Tiso_gene_13306|Tiso_gene_15066}}
+
−
{{#set: in pathway=PWY-7092|PWY-6002}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 19:35, 21 March 2018

Reaction GAPDHSYNEC-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-glyceraldehyde 3-phosphate[c] + 1 phosphate[c] + 1 NAD(P)+[c] <=> 1 NAD(P)H[c] + 1 1,3-bisphospho-D-glycerate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GAPDHSYNEC-RXN&oldid=42549"