Difference between revisions of "Tiso gene 5940"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15291 RXN-15291] == * direction: ** LEFT-TO-RIGHT * common name: ** luteolin monoglucuronide &b...")
(Created page with "Category:Gene == Gene Tiso_gene_5940 == * right end position: ** 3048 * transcription direction: ** POSITIVE * left end position: ** 226 * centisome position: ** 1.7744975...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15291 RXN-15291] ==
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== Gene Tiso_gene_5940 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3048
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* common name:
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* transcription direction:
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** luteolin monoglucuronide β-glucuronidase
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** POSITIVE
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** beta-glucuronidase
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* left end position:
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* ec number:
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** 226
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** [http://enzyme.expasy.org/EC/3.2.1.31 EC-3.2.1.31]
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* centisome position:
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** 1.7744975   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CHORISMATEMUT-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[LUTEOLIN-7-O-BETA-D-GLUCURONIDE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-12521]][c] '''+''' 1 [[5734-TETRAHYDROXYFLAVONE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 luteolin 7-O-β-D-glucuronide[c] '''=>''' 1 H+[c] '''+''' 1 β-D-glucuronate[c] '''+''' 1 luteolin[c]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[PREPHENATEDEHYDRAT-RXN]]
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* [[Tiso_gene_13087]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7445]], luteolin triglucuronide degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7445 PWY-7445]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PHESYN]]
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* [[PWY-6120]]
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* [[PWY-3462]]
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* [[PWY-3461]]
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* [[PWY-7626]]
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* [[PWY-7432]]
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* [[TYRSYN]]
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* [[PWY-6627]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3048}}
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{{#set: common name=luteolin monoglucuronide β-glucuronidase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=beta-glucuronidase}}
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{{#set: left end position=226}}
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{{#set: ec number=EC-3.2.1.31}}
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{{#set: centisome position=1.7744975    }}
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{{#set: gene associated=Tiso_gene_13087}}
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{{#set: reaction associated=CHORISMATEMUT-RXN|PREPHENATEDEHYDRAT-RXN}}
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{{#set: in pathway=PWY-7445}}
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{{#set: pathway associated=PHESYN|PWY-6120|PWY-3462|PWY-3461|PWY-7626|PWY-7432|TYRSYN|PWY-6627}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:35, 21 March 2018

Gene Tiso_gene_5940

  • right end position:
    • 3048
  • transcription direction:
    • POSITIVE
  • left end position:
    • 226
  • centisome position:
    • 1.7744975
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5940&oldid=42557"