Difference between revisions of "ILEUDEG-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-GUANINE-N7--METHYLTRANSFERASE-RXN TRNA-GUANINE-N7--METHYLTRANSFERASE-RXN] == * direction: ** L...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-GUANINE-N7--METHYLTRANSFERASE-RXN TRNA-GUANINE-N7--METHYLTRANSFERASE-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** ORF
+
** L-isoleucine degradation I
−
** trna_(guanine-n-)-methyltransferase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.1.1.33 EC-2.1.1.33]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''4''' reactions found over '''6''' reactions in the full pathway
−
** 1 [[Guanine46-in-tRNA]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[tRNA-Containing-N7-Methylguanine-46]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
+
* [[2KETO-3METHYLVALERATE-RXN]]
−
* With common name(s):
+
** 3 associated gene(s):
−
** 1 a guanine46 in tRNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 an N7-methylguanine46 in tRNA[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
+
*** [[Tiso_gene_3260]]
−
 
+
*** [[Tiso_gene_18084]]
−
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_11793]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** 1 reconstruction source(s) associated:
−
* [[Tiso_gene_17963]]
+
*** [[orthology-creinhardtii]]
−
** IN-SILICO_ANNOTATION
+
* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
−
***EC-NUMBER
+
** 3 associated gene(s):
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_14984]]
−
* [[Tiso_gene_14922]]
+
*** [[Tiso_gene_18403]]
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_17748]]
−
***EC-NUMBER
+
** 7 reconstruction source(s) associated:
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[annotation-experimental_annotation]]
−
* [[Tiso_gene_5561]]
+
*** [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
*** [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** [[orthology-athaliana]]
−
* [[Tiso_gene_6175]]
+
*** [[orthology-synechocystis]]
−
** IN-SILICO_ANNOTATION
+
*** [[manual-primary_network]]
−
***EC-NUMBER
+
*** [[orthology-creinhardtii]]
−
== Pathways  ==
+
* [[METHYLACETOACETYLCOATHIOL-RXN]]
−
== Reconstruction information  ==
+
** 3 associated gene(s):
−
* [[orthology]]:
+
*** [[Tiso_gene_16181]]
−
** [[pantograph]]:
+
*** [[Tiso_gene_17451]]
−
*** [[esiliculosus]]
+
*** [[Tiso_gene_15327]]
−
* [[annotation]]:
+
** 2 reconstruction source(s) associated:
−
** [[pathwaytools]]:
+
*** [[orthology-athaliana]]
−
*** [[in-silico_annotation]]
+
*** [[orthology-esiliculosus]]
 +
* [[TIGLYLCOA-HYDROXY-RXN]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_14257]]
 +
*** [[Tiso_gene_14262]]
 +
*** [[Tiso_gene_6885]]
 +
*** [[Tiso_gene_5857]]
 +
*** [[Tiso_gene_16145]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.178-RXN 1.1.1.178-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=2-METHYLACYL-COA-DEHYDROGENASE-RXN 2-METHYLACYL-COA-DEHYDROGENASE-RXN]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-2759}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00600 R00600]
+
{{#set: taxonomic range=TAX-2157}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: common name=ORF}}
+
{{#set: common name=L-isoleucine degradation I}}
−
{{#set: common name=trna_(guanine-n-)-methyltransferase}}
+
{{#set: reaction found=4}}
−
{{#set: ec number=EC-2.1.1.33}}
+
{{#set: total reaction=6}}
−
{{#set: gene associated=Tiso_gene_17963|Tiso_gene_14922|Tiso_gene_5561|Tiso_gene_6175}}
+
{{#set: completion rate=67.0}}
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 19:35, 21 March 2018

Pathway ILEUDEG-PWY

Reaction(s) found

4 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ILEUDEG-PWY&oldid=42577"