Difference between revisions of "Tiso gene 2309"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIMETHUROPORDEHYDROG-RXN DIMETHUROPORDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Gene == Gene Tiso_gene_2309 == * right end position: ** 15663 * transcription direction: ** POSITIVE * left end position: ** 12293 * centisome position: ** 56.217...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIMETHUROPORDEHYDROG-RXN DIMETHUROPORDEHYDROG-RXN] ==
+
== Gene Tiso_gene_2309 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 15663
−
* common name:
+
* transcription direction:
−
** at5g40850_mhk7_8
+
** POSITIVE
−
** ORF
+
* left end position:
−
* ec number:
+
** 12293
−
** [http://enzyme.expasy.org/EC/1.3.1.76 EC-1.3.1.76]
+
* centisome position:
 +
** 56.21713   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[NAD+-ADP-RIBOSYLTRANSFERASE-RXN]]
−
** 1 [[DIHYDROSIROHYDROCHLORIN]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[SIROHYDROCHLORIN]][c] '''+''' 2 [[PROTON]][c]
+
−
* With common name(s):
+
−
** 1 precorrin-2[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 sirohydrochlorin[c] '''+''' 2 H+[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_15852]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_8614]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7377 PWY-7377]
+
−
** '''3''' reactions found over '''15''' reactions in the full pathway
+
−
* [[PWY-5194]], siroheme biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5194 PWY-5194]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=15663}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15613 15613]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=12293}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03947 R03947]
+
{{#set: centisome position=56.21713    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=NAD+-ADP-RIBOSYLTRANSFERASE-RXN}}
−
{{#set: common name=at5g40850_mhk7_8}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: ec number=EC-1.3.1.76}}
+
−
{{#set: gene associated=Tiso_gene_15852|Tiso_gene_8614}}
+
−
{{#set: in pathway=PWY-7377|PWY-5194}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:35, 21 March 2018

Gene Tiso_gene_2309

  • right end position:
    • 15663
  • transcription direction:
    • POSITIVE
  • left end position:
    • 12293
  • centisome position:
    • 56.21713
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2309&oldid=42579"