Difference between revisions of "PWY-6808"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8655 RXN-8655] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase_a ** l...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6808 PWY-6808] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8655 RXN-8655] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6808 PWY-6808] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
 
* common name:
 
* common name:
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** lipoate-protein_ligase_a
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** dTDP-D-forosamine biosynthesis
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** lipoate-protein_ligase
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* Synonym(s):
 
* Synonym(s):
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** TDP-D-forosamine biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''9''' reactions in the full pathway
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** 1 [[LIPOYL-AMP]][c] '''+''' 1 [[Lipoyl-Protein-L-Lysine]][c] '''=>''' 1 [[AMP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Lipoyl-Protein-N6-lipoyllysine]][c]
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* [[DTDPGLUCDEHYDRAT-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 lipoyl-adenylate[c] '''+''' 1 a [lipoyl-carrier protein]-L-lysine[c] '''=>''' 1 AMP[c] '''+''' 2 H+[c] '''+''' 1 a [lipoyl-carrier protein]-N6-lipoyl-L-lysine[c]
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*** [[Tiso_gene_7329]]
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*** [[Tiso_gene_12394]]
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== Genes associated with this reaction  ==
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** 4 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-athaliana]]
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* [[Tiso_gene_4493]]
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*** [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-synechocystis]]
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***AUTOMATED-NAME-MATCH
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_17216]]
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* [[DTDPGLUCOSEPP-RXN]]
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** IN-SILICO_ANNOTATION
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** 1 associated gene(s):
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***AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_14704]]
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* [[Tiso_gene_4494]]
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** 1 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[orthology-synechocystis]]
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***AUTOMATED-NAME-MATCH
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== Reaction(s) not found ==
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* [[Tiso_gene_8713]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12404 RXN-12404]
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12406 RXN-12406]
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***AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12407 RXN-12407]
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* [[Tiso_gene_17215]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12408 RXN-12408]
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12409 RXN-12409]
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***AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12943 RXN-12943]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16262 RXN-16262]
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* [[PWY0-522]], lipoate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-522 PWY0-522]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* LIGAND-MAP:
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** [http://www.genome.jp/dbget-bin/www_bget?R07771 R07771]
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** [http://www.genome.jp/dbget-bin/www_bget?map00523 map00523]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-201174}}
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{{#set: common name=lipoate-protein_ligase_a}}
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{{#set: common name=dTDP-D-forosamine biosynthesis}}
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{{#set: common name=lipoate-protein_ligase}}
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{{#set: common name=TDP-D-forosamine biosynthesis}}
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{{#set: gene associated=Tiso_gene_4493|Tiso_gene_17216|Tiso_gene_4494|Tiso_gene_8713|Tiso_gene_17215}}
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{{#set: reaction found=2}}
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{{#set: in pathway=PWY0-522}}
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{{#set: total reaction=9}}
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{{#set: reconstruction category=annotation}}
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{{#set: completion rate=22.0}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:36, 21 March 2018

Pathway PWY-6808

  • taxonomic range:
  • common name:
    • dTDP-D-forosamine biosynthesis
  • Synonym(s):
    • TDP-D-forosamine biosynthesis

Reaction(s) found

2 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6808&oldid=42667"