Difference between revisions of "SHIKIMATE-KINASE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_4492 == * left end position: ** 8290 * transcription direction: ** POSITIVE * right end position: ** 11272 * centisome position: ** 56.0400...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-KINASE-RXN SHIKIMATE-KINASE-RXN] == * direction: ** REVERSIBLE * common name: ** 3-dehydr...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_4492 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-KINASE-RXN SHIKIMATE-KINASE-RXN] ==
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* left end position:
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* direction:
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** 8290
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** 3-dehydroquinate_synthase
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* right end position:
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* ec number:
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** 11272
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** [http://enzyme.expasy.org/EC/2.7.1.71 EC-2.7.1.71]
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* centisome position:
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** 56.04002   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[SERINE-O-ACETTRAN-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[ATP]][c] '''+''' 1 [[SHIKIMATE]][c] '''<=>''' 1 [[SHIKIMATE-5P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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***ec-number
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* With common name(s):
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** [[pantograph]]-[[athaliana]]
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** 1 ATP[c] '''+''' 1 shikimate[c] '''<=>''' 1 shikimate 3-phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[creinhardtii]]
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* Gene: [[Tiso_gene_12435]]
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== Pathways associated ==
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** Source: [[orthology-esiliculosus]]
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* [[CYSTSYN-PWY]]
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* Gene: [[Tiso_gene_3974]]
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* [[PWY-7274]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-6936]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=8290}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13121 13121]
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{{#set: right end position=11272}}
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* LIGAND-RXN:
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{{#set: centisome position=56.04002    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02412 R02412]
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{{#set: reaction associated=SERINE-O-ACETTRAN-RXN}}
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* UNIPROT:
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{{#set: pathway associated=CYSTSYN-PWY|PWY-7274|PWY-6936}}
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** [http://www.uniprot.org/uniprot/P0A6D7 P0A6D7]
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** [http://www.uniprot.org/uniprot/Q9PIB5 Q9PIB5]
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** [http://www.uniprot.org/uniprot/P07547 P07547]
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** [http://www.uniprot.org/uniprot/P08566 P08566]
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** [http://www.uniprot.org/uniprot/P43880 P43880]
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** [http://www.uniprot.org/uniprot/P63600 P63600]
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** [http://www.uniprot.org/uniprot/Q9CEU1 Q9CEU1]
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** [http://www.uniprot.org/uniprot/P37944 P37944]
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** [http://www.uniprot.org/uniprot/P0A6E1 P0A6E1]
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** [http://www.uniprot.org/uniprot/P10880 P10880]
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** [http://www.uniprot.org/uniprot/Q00497 Q00497]
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** [http://www.uniprot.org/uniprot/P34003 P34003]
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** [http://www.uniprot.org/uniprot/P43906 P43906]
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** [http://www.uniprot.org/uniprot/P72796 P72796]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=3-dehydroquinate_synthase}}
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{{#set: ec number=EC-2.7.1.71}}
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{{#set: gene associated=Tiso_gene_12435|Tiso_gene_3974}}
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{{#set: in pathway=PWY-6163}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:36, 21 March 2018

Reaction SHIKIMATE-KINASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • 3-dehydroquinate_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 shikimate[c] <=> 1 shikimate 3-phosphate[c] + 1 H+[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate: PWY-6163
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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