Difference between revisions of "SHIKIMATE-KINASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8655 RXN-8655] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase_a ** l...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-KINASE-RXN SHIKIMATE-KINASE-RXN] == * direction: ** REVERSIBLE * common name: ** 3-dehydr...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8655 RXN-8655] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-KINASE-RXN SHIKIMATE-KINASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** lipoate-protein_ligase_a
+
** 3-dehydroquinate_synthase
−
** lipoate-protein_ligase
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.1.71 EC-2.7.1.71]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[LIPOYL-AMP]][c] '''+''' 1 [[Lipoyl-Protein-L-Lysine]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Lipoyl-Protein-N6-lipoyllysine]][c] '''+''' 2 [[PROTON]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[SHIKIMATE]][c] '''<=>''' 1 [[SHIKIMATE-5P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 lipoyl-adenylate[c] '''+''' 1 a [lipoyl-carrier protein]-L-lysine[c] '''=>''' 1 AMP[c] '''+''' 1 a [lipoyl-carrier protein]-N6-lipoyl-L-lysine[c] '''+''' 2 H+[c]
+
** 1 ATP[c] '''+''' 1 shikimate[c] '''<=>''' 1 shikimate 3-phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17216]]
+
* Gene: [[Tiso_gene_12435]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***AUTOMATED-NAME-MATCH
+
* Gene: [[Tiso_gene_3974]]
−
* [[Tiso_gene_4494]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_4493]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_17215]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_8713]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-522]], lipoate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-522 PWY0-522]
+
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13121 13121]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07771 R07771]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02412 R02412]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* UNIPROT:
−
{{#set: common name=lipoate-protein_ligase_a}}
+
** [http://www.uniprot.org/uniprot/P0A6D7 P0A6D7]
−
{{#set: common name=lipoate-protein_ligase}}
+
** [http://www.uniprot.org/uniprot/Q9PIB5 Q9PIB5]
−
{{#set: gene associated=Tiso_gene_17216|Tiso_gene_4494|Tiso_gene_4493|Tiso_gene_17215|Tiso_gene_8713}}
+
** [http://www.uniprot.org/uniprot/P07547 P07547]
−
{{#set: in pathway=PWY0-522}}
+
** [http://www.uniprot.org/uniprot/P08566 P08566]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P43880 P43880]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P63600 P63600]
−
{{#set: reconstruction source=in-silico_annotation}}
+
** [http://www.uniprot.org/uniprot/Q9CEU1 Q9CEU1]
 +
** [http://www.uniprot.org/uniprot/P37944 P37944]
 +
** [http://www.uniprot.org/uniprot/P0A6E1 P0A6E1]
 +
** [http://www.uniprot.org/uniprot/P10880 P10880]
 +
** [http://www.uniprot.org/uniprot/Q00497 Q00497]
 +
** [http://www.uniprot.org/uniprot/P34003 P34003]
 +
** [http://www.uniprot.org/uniprot/P43906 P43906]
 +
** [http://www.uniprot.org/uniprot/P72796 P72796]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=3-dehydroquinate_synthase}}
 +
{{#set: ec number=EC-2.7.1.71}}
 +
{{#set: gene associated=Tiso_gene_12435|Tiso_gene_3974}}
 +
{{#set: in pathway=PWY-6163}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:36, 21 March 2018

Reaction SHIKIMATE-KINASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • 3-dehydroquinate_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 shikimate[c] <=> 1 shikimate 3-phosphate[c] + 1 H+[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate: PWY-6163
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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