Difference between revisions of "Tiso gene 4492"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINEPHEN-RXN AMINEPHEN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
(Created page with "Category:Gene == Gene Tiso_gene_4492 == * right end position: ** 11272 * transcription direction: ** POSITIVE * left end position: ** 8290 * centisome position: ** 56.0400...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINEPHEN-RXN AMINEPHEN-RXN] ==
+
== Gene Tiso_gene_4492 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 11272
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/1.4.3.21 EC-1.4.3.21]
+
** POSITIVE
 +
* left end position:
 +
** 8290
 +
* centisome position:
 +
** 56.04002   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[SERINE-O-ACETTRAN-RXN]]
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PHENYLETHYLAMINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PHENYLACETALDEHYDE]][c] '''+''' 1 [[AMMONIUM]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 oxygen[c] '''+''' 1 2-phenylethylamine[c] '''+''' 1 H2O[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 phenylacetaldehyde[c] '''+''' 1 ammonium[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_8756]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways  ==
+
−
* [[2PHENDEG-PWY]], phenylethylamine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=2PHENDEG-PWY 2PHENDEG-PWY]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-5751]], phenylethanol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5751 PWY-5751]
+
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
−
*** Tool: [[pantograph]]
+
** Source: [[orthology-synechocystis]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
*** Tool: [[pantograph]]
+
** Source: [[orthology-creinhardtii]]
 +
** Source: [[orthology-creinhardtii]]
 +
== Pathways associated ==
 +
* [[CYSTSYN-PWY]]
 +
* [[PWY-7274]]
 +
* [[PWY-6936]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=11272}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25265 25265]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=8290}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02613 R02613]
+
{{#set: centisome position=56.04002    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=SERINE-O-ACETTRAN-RXN}}
−
{{#set: ec number=EC-1.4.3.21}}
+
{{#set: pathway associated=CYSTSYN-PWY|PWY-7274|PWY-6936}}
−
{{#set: gene associated=Tiso_gene_8756}}
+
−
{{#set: in pathway=2PHENDEG-PWY|PWY-5751}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 20:36, 21 March 2018

Gene Tiso_gene_4492

  • right end position:
    • 11272
  • transcription direction:
    • POSITIVE
  • left end position:
    • 8290
  • centisome position:
    • 56.04002
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4492&oldid=42706"