Difference between revisions of "RXN-10911"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10911 RXN-10911] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** ORF...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5288 PWY-5288] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10911 RXN-10911] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3042 TAX-3042]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
+
 
* common name:
 
* common name:
−
** astaxanthin biosynthesis (bacteria, fungi, algae)
+
** polyketide_synthase
 +
** ORF
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
 +
** 3,4-dihydroxyphenylglycol dehydrogenase
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''2''' reactions found over '''10''' reactions in the full pathway
+
* With identifiers:
−
* [[RXN-8025]]
+
** 1 [[NADH]][c] '''+''' 1 [[DIHYDROXYPHENYLGLYCOLALDEHYDE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-11878]][c] '''+''' 1 [[NAD]][c]
−
* [[RXN-8026]]
+
* With common name(s):
−
== Reaction(s) not found ==
+
** 1 NADH[c] '''+''' 1 3,4-dihydroxyphenylglycolaldehyde[c] '''+''' 1 H+[c] '''=>''' 1 3,4-dihydroxyphenylglycol[c] '''+''' 1 NAD+[c]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8184 RXN-8184]
+
 
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8185 RXN-8185]
+
== Genes associated with this reaction  ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8186 RXN-8186]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8187 RXN-8187]
+
* Gene: [[Tiso_gene_6562]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8189 RXN-8189]
+
** Source: [[annotation-in-silico_annotation]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8190 RXN-8190]
+
*** Assignment: EC-NUMBER
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8214 RXN-8214]
+
* Gene: [[Tiso_gene_7649]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8215 RXN-8215]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6563]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_18459]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_5425]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5424]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-6342]], noradrenaline and adrenaline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6342 PWY-6342]
 +
** '''2''' reactions found over '''13''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2}}
+
* RHEA:
−
{{#set: taxonomic range=TAX-3042}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31147 31147]
−
{{#set: taxonomic range=TAX-4751}}
+
* LIGAND-RXN:
−
{{#set: common name=astaxanthin biosynthesis (bacteria, fungi, algae)}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04880 R04880]
−
{{#set: reaction found=2}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reaction not found=10}}
+
{{#set: common name=polyketide_synthase}}
−
{{#set: completion rate=20.0}}
+
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-1.1.1.1}}
 +
{{#set: common name=3,4-dihydroxyphenylglycol dehydrogenase}}
 +
{{#set: gene associated=Tiso_gene_6562|Tiso_gene_7649|Tiso_gene_6563|Tiso_gene_18459|Tiso_gene_5425|Tiso_gene_5424}}
 +
{{#set: in pathway=PWY-6342}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:36, 21 March 2018

Reaction RXN-10911

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):
    • 3,4-dihydroxyphenylglycol dehydrogenase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6342, noradrenaline and adrenaline degradation: PWY-6342
    • 2 reactions found over 13 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10911&oldid=42726"