Difference between revisions of "Tiso gene 16930"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15035 RXN-15035] == * direction: ** LEFT-TO-RIGHT * common name: ** lysophospholipase ** ORF *...")
 
(Created page with "Category:Gene == Gene Tiso_gene_16930 == * right end position: ** 5282 * transcription direction: ** POSITIVE * left end position: ** 1727 * centisome position: ** 30.1343...")
 
(4 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15035 RXN-15035] ==
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== Gene Tiso_gene_16930 ==
* direction:
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* right end position:
** LEFT-TO-RIGHT
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** 5282
* common name:
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* transcription direction:
** lysophospholipase
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** POSITIVE
** ORF
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* left end position:
* ec number:
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** 1727
** [http://enzyme.expasy.org/EC/3.1.1.5 EC-3.1.1.5]
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* centisome position:
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** 30.134356   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[GLUC1PURIDYLTRANS-RXN]]
** 1 [[WATER]][c] '''+''' 1 [[CPD-8355]][c] '''=>''' 1 [[OLEATE-CPD]][c] '''+''' 1 [[L-1-GLYCEROPHOSPHORYLETHANOL-AMINE]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
* With common name(s):
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*** Assignment: automated-name-match
** 1 H2O[c] '''+''' 1 1-18:1-2-lysophosphatidylethanolamine[c] '''=>''' 1 oleate[c] '''+''' 1 sn-glycero-3-phosphoethanolamine[c] '''+''' 1 H+[c]
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== Pathways associated ==
 
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* [[PWY-7343]]
== Genes associated with this reaction  ==
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* [[PWY-3801]]
Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7817]]
* [[Tiso_gene_2505]]
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* [[PWY-6527]]
** [[pantograph]]-[[esiliculosus]]
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* [[PWY-7238]]
* [[Tiso_gene_12478]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15692]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8353]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_12375]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_20565]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12479]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_19778]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_334]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-7409]], phospholipid remodeling (phosphatidylethanolamine, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7409 PWY-7409]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5282}}
{{#set: common name=lysophospholipase}}
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{{#set: transcription direction=POSITIVE}}
{{#set: common name=ORF}}
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{{#set: left end position=1727}}
{{#set: ec number=EC-3.1.1.5}}
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{{#set: centisome position=30.134356    }}
{{#set: gene associated=Tiso_gene_2505|Tiso_gene_12478|Tiso_gene_15692|Tiso_gene_8353|Tiso_gene_12375|Tiso_gene_20565|Tiso_gene_12479|Tiso_gene_19778|Tiso_gene_334}}
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{{#set: reaction associated=GLUC1PURIDYLTRANS-RXN}}
{{#set: in pathway=PWY-7409}}
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{{#set: pathway associated=PWY-7343|PWY-3801|PWY-7817|PWY-6527|PWY-7238}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:36, 21 March 2018

Gene Tiso_gene_16930

  • right end position:
    • 5282
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1727
  • centisome position:
    • 30.134356
  • Synonym(s):

Reactions associated

Pathways associated

External links