Difference between revisions of "RXN-14143"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-321 PWY-321] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-330...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14143 RXN-14143] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-321 PWY-321] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14143 RXN-14143] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
* common name:
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* ec number:
** cutin biosynthesis
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** [http://enzyme.expasy.org/EC/3.1.3.89 EC-3.1.3.89]
 
* Synonym(s):
 
* Synonym(s):
** cutin monomer biosynthesis
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''3''' reactions found over '''16''' reactions in the full pathway
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* With identifiers:
* [[PALMITOYL-COA-HYDROLASE-RXN]]
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** 1 [[DUMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[DEOXYURIDINE]][c]
** 1 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_801]]
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** 1 dUMP[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 2'-deoxyuridine[c]
** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
*** [[orthology-creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
* [[RXN-16389]]
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* Gene: [[Tiso_gene_6988]]
** 9 associated gene(s):
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** Source: [[orthology-creinhardtii]]
*** [[Tiso_gene_9394]]
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* Gene: [[Tiso_gene_9166]]
*** [[Tiso_gene_4191]]
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** Source: [[orthology-creinhardtii]]
*** [[Tiso_gene_500]]
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== Pathways  ==
*** [[Tiso_gene_136]]
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== Reconstruction information  ==
*** [[Tiso_gene_7855]]
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* Category: [[orthology]]
*** [[Tiso_gene_135]]
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** Source: [[orthology-creinhardtii]]
*** [[Tiso_gene_348]]
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*** Tool: [[pantograph]]
*** [[Tiso_gene_10876]]
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*** [[Tiso_gene_13394]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[RXN-9666]]
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** 1 associated gene(s):
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*** [[Tiso_gene_7477]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1062 RXN-1062]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1064 RXN-1064]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1065 RXN-1065]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16398 RXN-16398]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16400 RXN-16400]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16416 RXN-16416]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16417 RXN-16417]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9802 RXN-9802]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9803 RXN-9803]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9804 RXN-9804]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9805 RXN-9805]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9806 RXN-9806]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9807 RXN-9807]
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== External links  ==
 
== External links  ==
* ARACYC:
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* RHEA:
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-321 PWY-321]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29358 29358]
{{#set: taxonomic range=TAX-33090}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=cutin biosynthesis}}
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{{#set: ec number=EC-3.1.3.89}}
{{#set: common name=cutin monomer biosynthesis}}
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{{#set: gene associated=Tiso_gene_6988|Tiso_gene_9166}}
{{#set: reaction found=3}}
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{{#set: in pathway=}}
{{#set: total reaction=16}}
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{{#set: reconstruction category=orthology}}
{{#set: completion rate=19.0}}
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{{#set: reconstruction source=orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:37, 21 March 2018

Reaction RXN-14143

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dUMP[c] + 1 H2O[c] => 1 phosphate[c] + 1 2'-deoxyuridine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links