Difference between revisions of "RXN-12252"

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(Created page with "Category:Gene == Gene Tiso_gene_828 == * right end position: ** 27885 * transcription direction: ** POSITIVE * left end position: ** 21934 * centisome position: ** 76.7916...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12252 RXN-12252] == * direction: ** LEFT-TO-RIGHT * common name: ** para-nitrobenzyl_esterase *...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_828 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12252 RXN-12252] ==
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* right end position:
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* direction:
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** 27885
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** para-nitrobenzyl_esterase
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* left end position:
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** protein_chloroplastic
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** 21934
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** serine_esterase
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* centisome position:
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** alpha_beta_hydrolase_fold_protein
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** 76.79166   
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** sialate_o-acetylesterase-like_protein
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** ORF
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** lysophospholipase
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** alpha_beta_hydrolase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[5.99.1.3-RXN]]
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* With identifiers:
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** 1 [[CPD-13174]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13172]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-173]][c]
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* With common name(s):
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** 1 salicyl-6-hydroxy-2-cyclohexene-on-oyl[c] '''+''' 1 H2O[c] '''=>''' 1 6-hydroxy-2-cyclohexen-one-carboxylate[c] '''+''' 1 H+[c] '''+''' 1 salicyl alcohol[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_10066]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_4606]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_1538]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* Gene: [[Tiso_gene_11351]]
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_17029]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_19778]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_16518]]
 +
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_2556]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_12686]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_9429]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_1537]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_1922]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_4650]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: right end position=27885}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=para-nitrobenzyl_esterase}}
−
{{#set: left end position=21934}}
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{{#set: common name=protein_chloroplastic}}
−
{{#set: centisome position=76.79166    }}
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{{#set: common name=serine_esterase}}
−
{{#set: reaction associated=5.99.1.3-RXN}}
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{{#set: common name=alpha_beta_hydrolase_fold_protein}}
 +
{{#set: common name=sialate_o-acetylesterase-like_protein}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=lysophospholipase}}
 +
{{#set: common name=alpha_beta_hydrolase}}
 +
{{#set: ec number=EC-3.1.1.1}}
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{{#set: gene associated=Tiso_gene_10066|Tiso_gene_4606|Tiso_gene_1538|Tiso_gene_11351|Tiso_gene_17029|Tiso_gene_19778|Tiso_gene_16518|Tiso_gene_2556|Tiso_gene_12686|Tiso_gene_9429|Tiso_gene_1537|Tiso_gene_1922|Tiso_gene_4650}}
 +
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:37, 21 March 2018

Reaction RXN-12252

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • para-nitrobenzyl_esterase
    • protein_chloroplastic
    • serine_esterase
    • alpha_beta_hydrolase_fold_protein
    • sialate_o-acetylesterase-like_protein
    • ORF
    • lysophospholipase
    • alpha_beta_hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 salicyl-6-hydroxy-2-cyclohexene-on-oyl[c] + 1 H2O[c] => 1 6-hydroxy-2-cyclohexen-one-carboxylate[c] + 1 H+[c] + 1 salicyl alcohol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12252&oldid=42798"