Difference between revisions of "Tiso gene 4659"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIMETHYLGLYCINE-DEHYDROGENASE-RXN DIMETHYLGLYCINE-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIG...")
 
(Created page with "Category:Gene == Gene Tiso_gene_4659 == * right end position: ** 11632 * transcription direction: ** POSITIVE * left end position: ** 10639 * centisome position: ** 72.844...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIMETHYLGLYCINE-DEHYDROGENASE-RXN DIMETHYLGLYCINE-DEHYDROGENASE-RXN] ==
+
== Gene Tiso_gene_4659 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 11632
−
* common name:
+
* transcription direction:
−
** dimethylglycine_dehydrogenase
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/1.5.8.4 EC-1.5.8.4]
+
** 10639
 +
* centisome position:
 +
** 72.84492   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
−
** 1 [[PROTON]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[DIMETHYL-GLYCINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[SARCOSINE]][c] '''+''' 1 [[FORMALDEHYDE]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 H+[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 dimethylglycine[c] '''+''' 1 H2O[c] '''=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 sarcosine[c] '''+''' 1 formaldehyde[c]
+
== Pathways associated ==
−
 
+
* [[PWY-6386]]
−
== Genes associated with this reaction  ==
+
* [[PWY-6387]]
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_2717]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways ==
+
−
* [[PWY-3661]], glycine betaine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661 PWY-3661]
+
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=11632}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22496 22496]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=10639}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01565 R01565]
+
{{#set: centisome position=72.84492    }}
−
* UNIPROT:
+
{{#set: reaction associated=UDPNACETYLMURAMATEDEHYDROG-RXN}}
−
** [http://www.uniprot.org/uniprot/Q63342 Q63342]
+
{{#set: pathway associated=PWY-6386|PWY-6387}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=dimethylglycine_dehydrogenase}}
+
−
{{#set: ec number=EC-1.5.8.4}}
+
−
{{#set: gene associated=Tiso_gene_2717}}
+
−
{{#set: in pathway=PWY-3661}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 19:37, 21 March 2018

Gene Tiso_gene_4659

  • right end position:
    • 11632
  • transcription direction:
    • POSITIVE
  • left end position:
    • 10639
  • centisome position:
    • 72.84492
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4659&oldid=42803"