Difference between revisions of "HISTSYN-PWY"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMP AMP] == * smiles: ** C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP([O-])([O-])=O * inchi...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157...")
 
(4 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMP AMP] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY] ==
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* smiles:
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* taxonomic range:
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** C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP([O-])([O-])=O
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* inchi key:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** InChIKey=UDMBCSSLTHHNCD-KQYNXXCUSA-L
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** AMP
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** L-histidine biosynthesis
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* molecular weight:
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** 345.208   
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* Synonym(s):
 
* Synonym(s):
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** 5'-AMP
 
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** adenosine-monophosphate
 
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** adenylic acid
 
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** adenosine 5'-phosphate
 
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** adenosine 5'-monophosphate
 
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** adenylate
 
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** 5'-adenylic acid
 
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** 5'-adenosine monophosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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* [[AMP-DEAMINASE-RXN]]
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'''10''' reactions found over '''10''' reactions in the full pathway
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* [[ADENYL-KIN-RXN]]
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* [[ATPPHOSPHORIBOSYLTRANS-RXN]]
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* [[RXN-14074]]
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** 0 associated gene:
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* [[AMP-DEPHOSPHORYLATION-RXN]]
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** 1 reconstruction source(s) associated:
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* [[ATAMm]]
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*** [[manual-primary_network]]
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* [[ATAMf]]
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* [[GLUTAMIDOTRANS-RXN]]
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* [[AMP5N]]
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** 2 associated gene(s):
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* [[ATAM]]
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*** [[Tiso_gene_1565]]
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== Reaction(s) known to produce the compound ==
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*** [[Tiso_gene_11199]]
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* [[ARGININE--TRNA-LIGASE-RXN]]
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** 4 reconstruction source(s) associated:
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* [[RXN66-483]]
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*** [[manual-primary_network]]
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* [[RXN66-480]]
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*** [[orthology-creinhardtii]]
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* [[RXN0-7248]]
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*** [[orthology-synechocystis]]
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* [[RXN66-484]]
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*** [[orthology-esiliculosus]]
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* [[BIS5-ADENOSYL-TRIPHOSPHATASE-RXN]]
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* [[HISTALDEHYD-RXN]]
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* [[GMP-SYN-GLUT-RXN]]
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** 2 associated gene(s):
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* [[RXN66-555]]
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*** [[Tiso_gene_11386]]
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* [[ACYLCOASYN-RXN]]
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*** [[Tiso_gene_7381]]
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* [[3.1.13.4-RXN]]
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** 4 reconstruction source(s) associated:
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* [[ACETATE--COA-LIGASE-RXN]]
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*** [[annotation-experimental_annotation]]
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* [[DIPHTINE--AMMONIA-LIGASE-RXN]]
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*** [[annotation-in-silico_annotation]]
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* [[ASPARTATE--TRNA-LIGASE-RXN]]
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*** [[orthology-synechocystis]]
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* [[RXN-14570]]
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*** [[orthology-esiliculosus]]
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* [[ASNSYNB-RXN]]
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* [[HISTAMINOTRANS-RXN]]
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* [[R5PDP]]
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** 2 associated gene(s):
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* [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
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*** [[Tiso_gene_10680]]
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* [[RXN-7904]]
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*** [[Tiso_gene_10679]]
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* [[RXN-16418]]
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** 6 reconstruction source(s) associated:
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* [[6.1.1.24-RXN]]
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*** [[orthology-esiliculosus]]
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* [[ASNSYNA-RXN]]
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*** [[annotation-in-silico_annotation]]
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* [[DNA-LIGASE-ATP-RXN]]
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*** [[orthology-athaliana]]
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* [[LYSINE--TRNA-LIGASE-RXN]]
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*** [[orthology-synechocystis]]
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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*** [[manual-primary_network]]
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* [[RXN-15733]]
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*** [[orthology-creinhardtii]]
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* [[RXN-9386]]
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* [[HISTCYCLOHYD-RXN]]
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* [[APN]]
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** 2 associated gene(s):
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* [[RXN-9623]]
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*** [[Tiso_gene_5047]]
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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*** [[Tiso_gene_11297]]
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* [[RXN-8655]]
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** 6 reconstruction source(s) associated:
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* [[ASPARAGINE--TRNA-LIGASE-RXN]]
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*** [[orthology-esiliculosus]]
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* [[GLUTAMINE--TRNA-LIGASE-RXN]]
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*** [[annotation-in-silico_annotation]]
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* [[6.3.4.10-RXN]]
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*** [[orthology-athaliana]]
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* [[ARGSUCCINSYN-RXN]]
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*** [[orthology-synechocystis]]
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* [[RXN-2001]]
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*** [[manual-primary_network]]
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* [[RXN0-1141]]
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*** [[orthology-creinhardtii]]
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* [[1.8.4.9-RXN]]
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* [[HISTIDPHOS-RXN]]
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* [[LNLNCACOAL]]
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** 1 associated gene(s):
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* [[THREONINE--TRNA-LIGASE-RXN]]
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*** [[Tiso_gene_14713]]
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* [[AAL_fum]]
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** 2 reconstruction source(s) associated:
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* [[H2PTERIDINEPYROPHOSPHOKIN-RXN]]
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*** [[manual-primary_network]]
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* [[METHIONINE--TRNA-LIGASE-RXN]]
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*** [[annotation-experimental_annotation]]
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* [[RXN-17919]]
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* [[HISTOLDEHYD-RXN]]
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* [[6.2.1.34-RXN]]
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** 2 associated gene(s):
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* [[RXN-12978]]
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*** [[Tiso_gene_11386]]
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* [[ALANINE--TRNA-LIGASE-RXN]]
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*** [[Tiso_gene_7381]]
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* [[RXN0-7238]]
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** 5 reconstruction source(s) associated:
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* [[RXN0-7239]]
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*** [[annotation-in-silico_annotation]]
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* [[RXN-13039]]
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*** [[orthology-athaliana]]
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* [[RXN-9644]]
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*** [[annotation-experimental_annotation]]
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* [[PROLINE--TRNA-LIGASE-RXN]]
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*** [[orthology-synechocystis]]
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* [[ADPSUGPPHOSPHAT-RXN]]
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*** [[orthology-esiliculosus]]
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* [[RXN-8348]]
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* [[HISTPRATPHYD-RXN]]
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* [[VALINE--TRNA-LIGASE-RXN]]
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** 1 associated gene(s):
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* [[RXN-1126]]
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*** [[Tiso_gene_11297]]
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* [[PEPSYNTH-RXN]]
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** 5 reconstruction source(s) associated:
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* [[RXN-16165]]
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*** [[orthology-athaliana]]
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* [[RXN66-469]]
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*** [[orthology-creinhardtii]]
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* [[RXN-10919]]
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*** [[orthology-synechocystis]]
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* [[RXN0-6524]]
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*** [[orthology-esiliculosus]]
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* [[RXN-10862]]
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*** [[manual-primary_network]]
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* [[ADPA]]
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* [[IMIDPHOSDEHYD-RXN]]
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* [[RXN66-477]]
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** 0 associated gene:
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* [[HISTIDINE--TRNA-LIGASE-RXN]]
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** 1 reconstruction source(s) associated:
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* [[RXN66-474]]
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*** [[manual-primary_network]]
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* [[RXN-12184]]
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* [[PRIBFAICARPISOM-RXN]]
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* [[RXN-13290]]
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** 2 associated gene(s):
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* [[RNA-LIGASE-ATP-RXN]]
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*** [[Tiso_gene_1565]]
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* [[TYROSINE--TRNA-LIGASE-RXN]]
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*** [[Tiso_gene_11199]]
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* [[RXN-16393]]
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** 7 reconstruction source(s) associated:
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* [[RXN-16389]]
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*** [[annotation-experimental_annotation]]
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* [[R223-RXN]]
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*** [[orthology-esiliculosus]]
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* [[TRANS-RXN0-623]]
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*** [[annotation-in-silico_annotation]]
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* [[RXN0-5038]]
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*** [[orthology-athaliana]]
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* [[ADENOSINE-KINASE-RXN]]
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*** [[orthology-synechocystis]]
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* [[ADENYLYLSULFATASE-RXN]]
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*** [[manual-primary_network]]
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* [[TMDPT]]
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*** [[orthology-creinhardtii]]
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* [[RXN66-474-R-2-HYDROXYSTEARATE/ATP/CO-A//CPD-14717/AMP/PPI.48.]]
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== Reaction(s) not found ==
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* [[GTPPYPHOSKIN-RXN]]
+
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* [[GMP-SYN-NH3-RXN]]
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* [[RXN-16401]]
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* [[RXN-16402]]
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* [[GDPPYPHOSKIN-RXN]]
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* [[RXN0-1441]]
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* [[SERINE--TRNA-LIGASE-RXN]]
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−
* [[LINOLENOYL-RXN]]
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* [[PANTOATE-BETA-ALANINE-LIG-RXN]]
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* [[DNNH]]
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* [[RXN-17155]]
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−
* [[RXN-16380]]
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* [[RNA-3-PHOSPHATE-CYCLASE-RXN]]
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* [[THIAMIN-PYROPHOSPHOKINASE-RXN]]
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* [[RXN-9673]]
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* [[CYSTEINE--TRNA-LIGASE-RXN]]
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* [[6.3.4.11-RXN]]
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* [[LEUCINE--TRNA-LIGASE-RXN]]
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−
* [[RXN-13614]]
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* [[GLYCINE--TRNA-LIGASE-RXN]]
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−
* [[PHENYLALANINE--TRNA-LIGASE-RXN]]
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−
* [[RXN-10]]
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−
* [[RXN-10695]]
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* [[RXN0-5098]]
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* [[ISOLEUCINE--TRNA-LIGASE-RXN]]
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* [[6.3.4.9-RXN]]
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−
* [[BIOTINLIG-RXN]]
+
−
* [[RXN0-2161]]
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−
* [[RXN-17127]]
+
−
* [[LNLCCOAL]]
+
−
* [[APYRASE-RXN]]
+
−
* [[GLURS-RXN]]
+
−
* [[RXN-17927]]
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−
* [[2.7.9.3-RXN]]
+
−
* [[ARDP]]
+
−
* [[FACOAL18111Z]]
+
−
* [[RXN0-2023]]
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−
* [[325-BISPHOSPHATE-NUCLEOTIDASE-RXN]]
+
−
== Reaction(s) of unknown directionality ==
+
−
* [[RPDPK]]
+
−
* [[RXN-16415]]
+
−
* [[PRPPSYN-RXN]]
+
−
* [[AMPSYN-RXN]]
+
 
== External links  ==
 
== External links  ==
−
* NCI:
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* ECOCYC:
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** [http://cactus.nci.nih.gov/ncidb2.2/?nsc=20264 20264]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
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* CAS : 61-19-8
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* ARACYC:
−
* METABOLIGHTS : MTBLC456215
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** [http://metacyc.org/ARA/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
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* PUBCHEM:
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{{#set: taxonomic range=TAX-2157}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=15938965 15938965]
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{{#set: taxonomic range=TAX-4751}}
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* HMDB : HMDB00045
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{{#set: taxonomic range=TAX-33090}}
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* LIGAND-CPD:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00020 C00020]
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{{#set: common name=L-histidine biosynthesis}}
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* CHEMSPIDER:
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{{#set: reaction found=10}}
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** [http://www.chemspider.com/Chemical-Structure.10239183.html 10239183]
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{{#set: total reaction=10}}
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* CHEBI:
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{{#set: completion rate=100.0}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=456215 456215]
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−
* BIGG : amp
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−
{{#set: smiles=C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP([O-])([O-])=O}}
+
−
{{#set: inchi key=InChIKey=UDMBCSSLTHHNCD-KQYNXXCUSA-L}}
+
−
{{#set: common name=AMP}}
+
−
{{#set: molecular weight=345.208    }}
+
−
{{#set: common name=5'-AMP|adenosine-monophosphate|adenylic acid|adenosine 5'-phosphate|adenosine 5'-monophosphate|adenylate|5'-adenylic acid|5'-adenosine monophosphate}}
+
−
{{#set: consumed by=AMP-DEAMINASE-RXN|ADENYL-KIN-RXN|RXN-14074|AMP-DEPHOSPHORYLATION-RXN|ATAMm|ATAMf|AMP5N|ATAM}}
+
−
{{#set: produced by=ARGININE--TRNA-LIGASE-RXN|RXN66-483|RXN66-480|RXN0-7248|RXN66-484|BIS5-ADENOSYL-TRIPHOSPHATASE-RXN|GMP-SYN-GLUT-RXN|RXN66-555|ACYLCOASYN-RXN|3.1.13.4-RXN|ACETATE--COA-LIGASE-RXN|DIPHTINE--AMMONIA-LIGASE-RXN|ASPARTATE--TRNA-LIGASE-RXN|RXN-14570|ASNSYNB-RXN|R5PDP|TRYPTOPHAN--TRNA-LIGASE-RXN|RXN-7904|RXN-16418|6.1.1.24-RXN|ASNSYNA-RXN|DNA-LIGASE-ATP-RXN|LYSINE--TRNA-LIGASE-RXN|UBIQUITIN--PROTEIN-LIGASE-RXN|RXN-15733|RXN-9386|APN|RXN-9623|4-COUMARATE--COA-LIGASE-RXN|RXN-8655|ASPARAGINE--TRNA-LIGASE-RXN|GLUTAMINE--TRNA-LIGASE-RXN|6.3.4.10-RXN|ARGSUCCINSYN-RXN|RXN-2001|RXN0-1141|1.8.4.9-RXN|LNLNCACOAL|THREONINE--TRNA-LIGASE-RXN|AAL_fum|H2PTERIDINEPYROPHOSPHOKIN-RXN|METHIONINE--TRNA-LIGASE-RXN|RXN-17919|6.2.1.34-RXN|RXN-12978|ALANINE--TRNA-LIGASE-RXN|RXN0-7238|RXN0-7239|RXN-13039|RXN-9644|PROLINE--TRNA-LIGASE-RXN|ADPSUGPPHOSPHAT-RXN|RXN-8348|VALINE--TRNA-LIGASE-RXN|RXN-1126|PEPSYNTH-RXN|RXN-16165|RXN66-469|RXN-10919|RXN0-6524|RXN-10862|ADPA|RXN66-477|HISTIDINE--TRNA-LIGASE-RXN|RXN66-474|RXN-12184|RXN-13290|RNA-LIGASE-ATP-RXN|TYROSINE--TRNA-LIGASE-RXN|RXN-16393|RXN-16389|R223-RXN|TRANS-RXN0-623|RXN0-5038|ADENOSINE-KINASE-RXN|ADENYLYLSULFATASE-RXN|TMDPT|RXN66-474-R-2-HYDROXYSTEARATE/ATP/CO-A//CPD-14717/AMP/PPI.48.|GTPPYPHOSKIN-RXN|GMP-SYN-NH3-RXN|RXN-16401|RXN-16402|GDPPYPHOSKIN-RXN|RXN0-1441|SERINE--TRNA-LIGASE-RXN|LINOLENOYL-RXN|PANTOATE-BETA-ALANINE-LIG-RXN|DNNH|RXN-17155|RXN-16380|RNA-3-PHOSPHATE-CYCLASE-RXN|THIAMIN-PYROPHOSPHOKINASE-RXN|RXN-9673|CYSTEINE--TRNA-LIGASE-RXN|6.3.4.11-RXN|LEUCINE--TRNA-LIGASE-RXN|RXN-13614|GLYCINE--TRNA-LIGASE-RXN|PHENYLALANINE--TRNA-LIGASE-RXN|RXN-10|RXN-10695|RXN0-5098|ISOLEUCINE--TRNA-LIGASE-RXN|6.3.4.9-RXN|BIOTINLIG-RXN|RXN0-2161|RXN-17127|LNLCCOAL|APYRASE-RXN|GLURS-RXN|RXN-17927|2.7.9.3-RXN|ARDP|FACOAL18111Z|RXN0-2023|325-BISPHOSPHATE-NUCLEOTIDASE-RXN}}
+
−
{{#set: consumed or produced by=RPDPK|RXN-16415|PRPPSYN-RXN|AMPSYN-RXN}}
+

Latest revision as of 19:38, 21 March 2018

Pathway HISTSYN-PWY

Reaction(s) found

10 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links





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