Difference between revisions of "Tiso gene 19398"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE-DIOXYGENASE-RXN CYSTEINE-DIOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Gene == Gene Tiso_gene_19398 == * right end position: ** 2181 * transcription direction: ** POSITIVE * left end position: ** 575 * centisome position: ** 24.43689...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE-DIOXYGENASE-RXN CYSTEINE-DIOXYGENASE-RXN] ==
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== Gene Tiso_gene_19398 ==
* direction:
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* right end position:
** LEFT-TO-RIGHT
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** 2181
* common name:
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* transcription direction:
** cysteine_dioxygenase
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** POSITIVE
* ec number:
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* left end position:
** [http://enzyme.expasy.org/EC/1.13.11.20 EC-1.13.11.20]
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** 575
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* centisome position:
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** 24.43689   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[ASPARAGHYD-RXN]]
** 1 [[CYS]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[3-SULFINOALANINE]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
* With common name(s):
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*** Assignment: automated-name-match
** 1 L-cysteine[c] '''+''' 1 oxygen[c] '''=>''' 1 3-sulfinoalanine[c] '''+''' 1 H+[c]
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** Source: [[orthology-synechocystis]]
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_1457]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-5331]], taurine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5331 PWY-5331]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[CYSTEINE-DEG-PWY]], L-cysteine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE-DEG-PWY CYSTEINE-DEG-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
*** Tool: [[pantograph]]
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== Pathways associated ==
* Category: [[annotation]]
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* [[ASPARAGINE-DEG1-PWY]]
** Source: [[annotation-in-silico_annotation]]
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* [[ASPASN-PWY]]
*** Tool: [[pathwaytools]]
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* [[ASPARAGINE-DEG1-PWY-1]]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: right end position=2181}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20441 20441]
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{{#set: transcription direction=POSITIVE}}
* LIGAND-RXN:
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{{#set: left end position=575}}
** [http://www.genome.jp/dbget-bin/www_bget?R00893 R00893]
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{{#set: centisome position=24.43689    }}
* UNIPROT:
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{{#set: reaction associated=ASPARAGHYD-RXN}}
** [http://www.uniprot.org/uniprot/P21816 P21816]
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{{#set: pathway associated=ASPARAGINE-DEG1-PWY|ASPASN-PWY|ASPARAGINE-DEG1-PWY-1}}
** [http://www.uniprot.org/uniprot/Q16878 Q16878]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=cysteine_dioxygenase}}
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{{#set: ec number=EC-1.13.11.20}}
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{{#set: gene associated=Tiso_gene_1457}}
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{{#set: in pathway=PWY-5331|CYSTEINE-DEG-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:38, 21 March 2018

Gene Tiso_gene_19398

  • right end position:
    • 2181
  • transcription direction:
    • POSITIVE
  • left end position:
    • 575
  • centisome position:
    • 24.43689
  • Synonym(s):

Reactions associated

Pathways associated

External links