Difference between revisions of "Tiso gene 18472"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOATE-BETA-ALANINE-LIG-RXN PANTOATE-BETA-ALANINE-LIG-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
 
(Created page with "Category:Gene == Gene Tiso_gene_18472 == * right end position: ** 2803 * transcription direction: ** POSITIVE * left end position: ** 1067 * centisome position: ** 35.5074...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOATE-BETA-ALANINE-LIG-RXN PANTOATE-BETA-ALANINE-LIG-RXN] ==
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== Gene Tiso_gene_18472 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2803
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* common name:
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* transcription direction:
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** ketopantoate_hydroxymethyltransferase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/6.3.2.1 EC-6.3.2.1]
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** 1067
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* centisome position:
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** 35.50749   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.3.16-RXN]]
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** 1 [[L-PANTOATE]][c] '''+''' 1 [[B-ALANINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PANTOTHENATE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 (R)-pantoate[c] '''+''' 1 β-alanine[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 (R)-pantothenate[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14466]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14465]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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== Pathways ==
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* [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2803}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10912 10912]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=1067}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02473 R02473]
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{{#set: centisome position=35.50749    }}
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* UNIPROT:
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{{#set: reaction associated=3.1.3.16-RXN}}
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** [http://www.uniprot.org/uniprot/P31663 P31663]
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** [http://www.uniprot.org/uniprot/Q9PIK2 Q9PIK2]
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** [http://www.uniprot.org/uniprot/P56061 P56061]
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** [http://www.uniprot.org/uniprot/P57035 P57035]
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** [http://www.uniprot.org/uniprot/Q9ZN52 Q9ZN52]
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** [http://www.uniprot.org/uniprot/Q09673 Q09673]
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** [http://www.uniprot.org/uniprot/O24210 O24210]
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** [http://www.uniprot.org/uniprot/Q9X713 Q9X713]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ketopantoate_hydroxymethyltransferase}}
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{{#set: ec number=EC-6.3.2.1}}
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{{#set: gene associated=Tiso_gene_14466|Tiso_gene_14465}}
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{{#set: in pathway=PANTO-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:38, 21 March 2018

Gene Tiso_gene_18472

  • right end position:
    • 2803
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1067
  • centisome position:
    • 35.50749
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18472&oldid=42932"