Difference between revisions of "Tiso gene 2798"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9003 RXN-9003] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Gene == Gene Tiso_gene_2798 == * right end position: ** 11028 * transcription direction: ** POSITIVE * left end position: ** 9176 * centisome position: ** 42.1633...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9003 RXN-9003] ==
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== Gene Tiso_gene_2798 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 11028
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
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** POSITIVE
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* left end position:
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** 9176
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* centisome position:
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** 42.163303   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.6.3.50-RXN]]
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** 1 [[4-hydroxybenzoate]][c] '''+''' 1 [[ALL-TRANS-HEXAPRENYL-DIPHOSPHATE]][c] '''=>''' 1 [[3-HEXAPRENYL-4-HYDROXYBENZOATE]][c] '''+''' 1 [[PPI]][c]
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** Source: [[orthology-esiliculosus]]
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* With common name(s):
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* Reaction: [[ATPASE-RXN]]
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** 1 4-hydroxybenzoate[c] '''+''' 1 all-trans-hexaprenyl diphosphate[c] '''=>''' 1 3-hexaprenyl-4-hydroxybenzoate[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_2848]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_11582]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_18201]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_10317]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY3O-19]], ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-19 PWY3O-19]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7235]], superpathway of ubiquinol-6 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7235 PWY-7235]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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* Reaction: [[ATPSYN-RXN]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* [[PWY-7219]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=11028}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05616 R05616]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=9176}}
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{{#set: ec number=EC-2.5.1.39}}
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{{#set: centisome position=42.163303    }}
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{{#set: gene associated=Tiso_gene_2848|Tiso_gene_11582|Tiso_gene_18201|Tiso_gene_10317}}
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{{#set: reaction associated=3.6.3.50-RXN|ATPASE-RXN|ATPSYN-RXN}}
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{{#set: in pathway=PWY3O-19|PWY-7235}}
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{{#set: pathway associated=PWY-7219}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:39, 21 March 2018

Gene Tiso_gene_2798

  • right end position:
    • 11028
  • transcription direction:
    • POSITIVE
  • left end position:
    • 9176
  • centisome position:
    • 42.163303
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2798&oldid=42968"