Difference between revisions of "PWY-5741"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9003 RXN-9003] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5741 PWY-5741] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9003 RXN-9003] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5741 PWY-5741] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
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** ethylmalonyl-CoA pathway
 
* Synonym(s):
 
* Synonym(s):
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** ethylmalonyl pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''11''' reactions in the full pathway
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** 1 [[4-hydroxybenzoate]][c] '''+''' 1 [[ALL-TRANS-HEXAPRENYL-DIPHOSPHATE]][c] '''=>''' 1 [[3-HEXAPRENYL-4-HYDROXYBENZOATE]][c] '''+''' 1 [[PPI]][c]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 4-hydroxybenzoate[c] '''+''' 1 all-trans-hexaprenyl diphosphate[c] '''=>''' 1 3-hexaprenyl-4-hydroxybenzoate[c] '''+''' 1 diphosphate[c]
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*** [[Tiso_gene_16181]]
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*** [[Tiso_gene_15327]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_17451]]
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Genes have been associated with this reaction based on different elements listed below.
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** 4 reconstruction source(s) associated:
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* [[Tiso_gene_11582]]
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*** [[orthology-athaliana]]
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** [[pantograph]]-[[athaliana]]
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*** [[orthology-creinhardtii]]
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* [[Tiso_gene_18201]]
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*** [[orthology-synechocystis]]
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** [[pantograph]]-[[athaliana]]
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_10317]]
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* [[RXN-5901]]
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** [[pantograph]]-[[esiliculosus]]
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** 9 associated gene(s):
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* [[Tiso_gene_2848]]
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*** [[Tiso_gene_500]]
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** [[pantograph]]-[[athaliana]]
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*** [[Tiso_gene_6563]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_135]]
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== Pathways  ==
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*** [[Tiso_gene_10876]]
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* [[PWY3O-19]], ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-19 PWY3O-19]
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*** [[Tiso_gene_5424]]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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*** [[Tiso_gene_13394]]
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* [[PWY-7235]], superpathway of ubiquinol-6 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7235 PWY-7235]
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*** [[Tiso_gene_6562]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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*** [[Tiso_gene_136]]
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== Reconstruction information  ==
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*** [[Tiso_gene_5425]]
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* [[orthology]]:
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** 1 reconstruction source(s) associated:
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** [[pantograph]]:
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*** [[annotation-in-silico_annotation]]
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*** [[athaliana]]
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== Reaction(s) not found ==
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*** [[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXBUTYRYL-COA-DEHYDRATASE-RXN 3-HYDROXBUTYRYL-COA-DEHYDRATASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=MALATE--COA-LIGASE-RXN MALATE--COA-LIGASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=MALYL-COA-LYASE-RXN MALYL-COA-LYASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16391 RXN-16391]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8957 RXN-8957]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8958 RXN-8958]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8959 RXN-8959]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8960 RXN-8960]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8961 RXN-8961]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05616 R05616]
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{{#set: common name=ethylmalonyl-CoA pathway}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ethylmalonyl pathway}}
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{{#set: ec number=EC-2.5.1.39}}
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{{#set: reaction found=2}}
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{{#set: gene associated=Tiso_gene_11582|Tiso_gene_18201|Tiso_gene_10317|Tiso_gene_2848}}
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{{#set: total reaction=11}}
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{{#set: in pathway=PWY3O-19|PWY-7235}}
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{{#set: completion rate=18.0}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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Latest revision as of 19:39, 21 March 2018

Pathway PWY-5741

  • taxonomic range:
  • common name:
    • ethylmalonyl-CoA pathway
  • Synonym(s):
    • ethylmalonyl pathway

Reaction(s) found

2 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5741&oldid=42978"